Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00785 ATGTTAAAAGCAATAGCTCCTGGGTTGTTGATTTCTTCTTTAATCTTATCCGTCTCTGCTGTCGATAATGGATACCCTCGCTGTAATTGCGACGACGAAGGTTTCTGGAGTGTCGATAGCATTTTGGAATGCCAGAGAGTGAGCGATTTCCTGATCGCAATCGCCTACTTCTCGATCCCTATCGAGCTCCTTTACTTCGTAAGCTGCTCCAATCTCCCATTCAAATGGGTCCTCTTTCAATTCATCGCCTTCATAGTTCTTTGTGGATTAACCCATTTGCTCAATGGGTGGACTTACGCCCCACACCCTTTCCAGCTGATGCTGGCTCTTACCGTCTTCAAATTTCTTACTGCTTTGGTCTCATGTGCAACCGCAATTACTCTCTTAACTCTCATTCCTCTGCTTCTCAAAGTAAAGGTGAGAGAGCTCTTCTTAAAGAAGAAGGCTTGGGAGCTCGACCAAGAGGTTGGGATGATGAAGAAACAGACGGAAGCAAGCTTACATGTTCGAATGCTGACCCAGGAGATTCGGAAGTCGCTTGATAGGCATACTATCTTGTATACCACTCTAGTTGAGCTATCGAAGACGTTGGACCTACAGAATTGTGTAGTTTGGATGCCTAATGAGGATAAGACAGAGATGAATCTGACCCACGAATTAAAAGGGAGGAGTTCGTCGAGTTCATACCATATTTCGATCCCAATTAATGATCCAGATGTATTGGAGATCAAGGAGAGCAAGGGAGTAAAGATCCTGAGACCGGACTCGGCACTTGGCGCTGCAAGTAGTGGCGAGGTGGGTGATTCGAGTGCTGTAGCTGCCATTCGAATGCCAATGCTAAGAGTGTCAAACTTCAAAGGGGGGACACCGGAGATGGTCTCGACATGTTATGCAATTCTGGTTTTGGTTCTTCCGAGTGCAGATGCTAGAGCCTGGAGCTACCATGAACTGGAGATTGTTGAGGTGGTTGCTGATCAGGTGGCTGTTGCTCTCTCCCATGCTTCAGTACTGGAAGACTCTCAGCTGATGAGAGATAAATTGGTGGAGCAGAACCGTGCTTTGCAACAGGCTAGGAAAGATGCAATGATGGCAAGCCAAGCAAGGAATTCATTCCAGAAGGTGATGAGCCATGGAATGAGGAGGCCGATGCACTCGATCTCAGGCCTGCTTTCAATGATACAACAAGAGGATATGGGCATTGATCAGGGGATGATTGTCGACACAATGGTGAAGACCAGCAGTGTCATCTCAACCTTGATAAATGATGTAATGGATATTTCACCAAAAGATAATGTAAAATTTCCATTAGAGATGAGATCCTTCCGGTTACATGCCATGATAAAGGAAGCAGCCTGCCTTGCAAAGTGCCTTTTTGTTTGTAGGGGTTTCAGTTTCAGGATTGAGGTTGATAACTCATTACCTGATCGTGTGATGGGGGATGAGAAAAGAATTTTTCAGGTGATACTGCATATGGTTGGTAATCTGTTGAATGGGTGTGATGGAGGAGGGACCGTAACCTTCCGAGTCTTCTCGGAGAGTGGAAGTGAGGGCAGGACTGATCAAAGATGGACAATGTGGAGGCCAAGCTCATCTGATGGGTGCACGAATATAAAGTTTGAAATTGGAATTAACAATGGTGGTTCTCAATCAGAGGGCTTGATCTCATCAGTGCAGCTTGCTAGTAGGAAACACAACAGTGAGGGAGTGGAGGGGGGTCTGAGCTTCACTGTGTGCAAAAAACTCGTGCAGATGATGCAAGGTAATATCTGGGTTGTTCCAAACTCCCATGGCCTTGCTCAAAGCATGGCCTTCATCGTCAGGTTTCAGCTCCAACCATCTATAGGGGGTGGCATCTTTGAAGCTGGAGGATCCTCTGATCTTCCACCTTCCAACTCTCTGTTCAGAGGCCTTCAAGTTATATTAGCTGATGACGACGACGTCAATAGGGCAGTGACCCGTAAACTACTCGAAAAGCTGGGTTGCCATGTATCTGCTGTTTCATCTGGGTTTGAATGCCTAAGTGCGCTGGGCCCTTCCGGAACTTCTTTCCAAATCGTTCTTTTGGACCTCCACCTGCCTGATATGGATGGGTTTGAAGTTGCAAAAAAAATCCGAAAGTTCCGTAGCCGGGGTTGGCCATTGATTGTAGCCCTGACAGCGAGTGCTGATGAAGATGTGTGGGAAAGATGCCGGCAGATAGGAATGAATGGCGTCATTCGGAAACCAGTTCTGTTACACGGAATGGCGGATGAGCTCCGCAGAGTCATACAACTGGCAAGCAAAGGTGTGTGA 2292 0.4677 MLKAIAPGLLISSLILSVSAVDNGYPRCNCDDEGFWSVDSILECQRVSDFLIAIAYFSIPIELLYFVSCSNLPFKWVLFQFIAFIVLCGLTHLLNGWTYAPHPFQLMLALTVFKFLTALVSCATAITLLTLIPLLLKVKVRELFLKKKAWELDQEVGMMKKQTEASLHVRMLTQEIRKSLDRHTILYTTLVELSKTLDLQNCVVWMPNEDKTEMNLTHELKGRSSSSSYHISIPINDPDVLEIKESKGVKILRPDSALGAASSGEVGDSSAVAAIRMPMLRVSNFKGGTPEMVSTCYAILVLVLPSADARAWSYHELEIVEVVADQVAVALSHASVLEDSQLMRDKLVEQNRALQQARKDAMMASQARNSFQKVMSHGMRRPMHSISGLLSMIQQEDMGIDQGMIVDTMVKTSSVISTLINDVMDISPKDNVKFPLEMRSFRLHAMIKEAACLAKCLFVCRGFSFRIEVDNSLPDRVMGDEKRIFQVILHMVGNLLNGCDGGGTVTFRVFSESGSEGRTDQRWTMWRPSSSDGCTNIKFEIGINNGGSQSEGLISSVQLASRKHNSEGVEGGLSFTVCKKLVQMMQGNIWVVPNSHGLAQSMAFIVRFQLQPSIGGGIFEAGGSSDLPPSNSLFRGLQVILADDDDVNRAVTRKLLEKLGCHVSAVSSGFECLSALGPSGTSFQIVLLDLHLPDMDGFEVAKKIRKFRSRGWPLIVALTASADEDVWERCRQIGMNGVIRKPVLLHGMADELRRVIQLASKGV* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00785 763 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 352 428 IPR036097 GO:0000155|GO:0007165
Eupl07g00785 763 Gene3D - 638 762 - -
Eupl07g00785 763 CDD HATPase_ETR2_ERS2-EIN4-like 473 606 - -
Eupl07g00785 763 PIRSF Ethylen_sen_hybr_HK 1 763 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Eupl07g00785 763 Gene3D - 158 333 IPR029016 -
Eupl07g00785 763 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 436 595 IPR036890 -
Eupl07g00785 763 Coils Coil 337 360 - -
Eupl07g00785 763 FunFam Ethylene receptor 635 759 - -
Eupl07g00785 763 FunFam Ethylene receptor 4 334 428 - -
Eupl07g00785 763 ProSiteProfiles Response regulatory domain profile. 638 756 IPR001789 GO:0000160
Eupl07g00785 763 SMART REC_2 637 756 IPR001789 GO:0000160
Eupl07g00785 763 Pfam GAF domain 181 331 IPR003018 GO:0005515
Eupl07g00785 763 SUPERFAMILY CheY-like 634 757 IPR011006 -
Eupl07g00785 763 Gene3D - 433 612 IPR036890 -
Eupl07g00785 763 SMART gaf_1 181 341 IPR003018 GO:0005515
Eupl07g00785 763 SMART HisKA_10 367 432 IPR003661 GO:0000155|GO:0007165
Eupl07g00785 763 CDD REC_ETR-like 637 752 - -
Eupl07g00785 763 CDD HisKA 365 427 IPR003661 GO:0000155|GO:0007165
Eupl07g00785 763 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 759 - -
Eupl07g00785 763 SUPERFAMILY GAF domain-like 184 334 - -
Eupl07g00785 763 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 608 IPR003594 -
Eupl07g00785 763 ProSiteProfiles Histidine kinase domain profile. 374 612 IPR005467 -
Eupl07g00785 763 Gene3D - 334 430 - -
Eupl07g00785 763 Pfam Response regulator receiver domain 639 743 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00785 Eupl-Chr7 24213214 24217626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00785 22 761 Miscellaneous Gene Families AT3G04580 63.249 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl07g00785 GAF 4.5e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00785 K14509 - ming:122077347 1157.9