Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00783 ATGGCGATGAACGAAAACAGCGGAAGTGGTGGTAGAGGAGACGATGATGAGGATGAAAGAGAGAACGGCGATGAACCGAGAGAGGGTGCGGTAGAGGTAGGTACCCGTCGACCGAGAGGCCGACCGCCAGGGTCAAAGAACAAGCCAAAGCCGCCGATCTTCGTGACCCGGGACAGCCCAAACGCTCTCCGAAGCCATGTGATGGAGGTTGCAGGTGGGGCCGATGTTGCGGAAAGCGTCGCCCAATTCGCCAGGAGGCGCCAGCGAGGTGTCTGTGTACTTAGCGGGAGCGGCGCAGTCGCCAACGTAACACTTCGACAGCCTGCCGCTCCGGGTGCGGTTGTAGCGTTACACGGCCGGTTCGAGATACTTTCTCTAACCGGTTCGTTCCTTCCTGGCCCAGCTCCGCCAGGTTCAACTGGGCTGACGGTCTACTTGGCGGGCGGTCAAGGGCAGGTAGTAGGTGGCAGCGTGGTTGGTACGCTTGTCGCTGCTGGCCCAGTCATGGTGATCGCGGCAACGTTCGCAAACGCTACATATGAGCGGCTACCACTAGAGGACGATGATGATGCTGGTAGTGGCGGGCAGGGACAGCTACCCGGCGGTGCAGGAAACTCACCGCCCGGAATTGGCAGCGGTACCGGGCAGCAGCATCAGCCCGGACTGCCCGACCCATCATCGTTAGCTATTTATAACCTGCCGCCGAACTTGCTACCTAATGGCGGGCAGCTGAACCATGACGCCTATGCTTGGGCTCATGCTCGCCCACCTTACTGA 777 0.6023 MAMNENSGSGGRGDDDEDERENGDEPREGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGAVANVTLRQPAAPGAVVALHGRFEILSLTGSFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGTLVAAGPVMVIAATFANATYERLPLEDDDDAGSGGQGQLPGGAGNSPPGIGSGTGQQHQPGLPDPSSLAIYNLPPNLLPNGGQLNHDAYAWAHARPPY* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00783 258 ProSiteProfiles PPC domain profile profile. 60 199 IPR005175 -
Eupl07g00783 258 SUPERFAMILY AF0104/ALDC/Ptd012-like 60 188 - -
Eupl07g00783 258 Gene3D - 63 190 - -
Eupl07g00783 258 PIRSF ESCAROLA 2 258 IPR014476 GO:0003680
Eupl07g00783 258 MobiDBLite consensus disorder prediction 1 59 - -
Eupl07g00783 258 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 254 IPR014476 GO:0003680
Eupl07g00783 258 FunFam AT-hook motif nuclear-localized protein 63 190 - -
Eupl07g00783 258 MobiDBLite consensus disorder prediction 185 236 - -
Eupl07g00783 258 MobiDBLite consensus disorder prediction 209 223 - -
Eupl07g00783 258 CDD DUF296 64 147 IPR005175 -
Eupl07g00783 258 Pfam Plants and Prokaryotes Conserved (PCC) domain 64 176 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00783 Eupl-Chr7 24131386 24132162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00783 26 258 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 72.458 7.23e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00783 - - nnu:104610098 386.341