Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00776 ATGGCTGCAGCAGGAACTGGTTCTCCTTGTGGTGCTTGTAAGTTCCTTAGAAGGAAGTGTGCATCAGACTGTATATTTGCACCATATTTCTGTTCCGAACAAGGTCCGGCTCGATTCGCCGCCATTCATAAGGTGTTTGGTGCTAGTAATGTGTCGAAATTGTTGTTGCACGTGCCGATCCCCGATCGATGCGAAGCTGTTGTTACAATTGCTTATGAAGCTCAAGCTAGGCTCAAAGATCCTGTCTATGGTTGTGTTGCACACATTTTTGCTCTCCAACAACAGGTAGCATGCTTACAAGCCCAACTGATGCAAGTGAAGGCTCAATTGGCTAACAACCTTGTCGATTCGAATTCGCAGTCGTTAGAGAATCATTGGAACGGAAACGTTGTCGGGGGATCTCAACATCTTACTAATTATCCAACATACATGCATTCCATCTCCCCTCAGAGCTCGCTCGACTCCATCGACAACGGCAACGACGGAATGGCGCCGATGCAAGAAATGCAGACAAGGGATGATCTTCCATTCCAACCTTGTACCAAGAAAAGATTGTCTCATAATGACTTGGGTGAGCTTCAAGCTCTGGCACTTAGGATGATGAGGCACTGA 612 0.4673 MAAAGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARLKDPVYGCVAHIFALQQQVACLQAQLMQVKAQLANNLVDSNSQSLENHWNGNVVGGSQHLTNYPTYMHSISPQSSLDSIDNGNDGMAPMQEMQTRDDLPFQPCTKKRLSHNDLGELQALALRMMRH* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00776 203 Coils Coil 89 109 - -
Eupl07g00776 203 Pfam Lateral organ boundaries (LOB) domain 9 107 IPR004883 -
Eupl07g00776 203 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 162 - -
Eupl07g00776 203 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00776 Eupl-Chr7 23834963 23835835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00776 4 202 AS2 family AT2G42430 57.021 7.24e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl07g00776 LOB 3.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00776 K13944 - cave:132166331 307.375