Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00775 ATGACAGGGTTCGGATCTCCATGTGGAGCCTGCAAGTTCTTGAGGAGGAAGTGTGTGAGGGGTTGTGTTTTTGCTCCTTATTTCTGTCATGAACAAGGAGCGACGCACTTCGCAGCGATCCACAAGGTTTTTGGTGCAAGCAATGTTTCGAAGCTTCTCGAACACCTCCCGGTCACGGATCGTTGTGAAGCTGCAGTCACAATCTCGTATGAAGCTCAAGCTAGGCTTCAAGATCCCATATATGGTTGCGTCTCACATATTTTCGCACTCCAACAGCAGGTTGTAAATCTACAAGCACAACTAGCCTCTCTCAAGGCCCAAGCAGCCCAAAGCCTTGTCAATGGTCCTCCTTCTTCTTCAAACCCTCAGGCAGACAAGTTTTATGGCAAATTTCCTGCTTACTCACAAGATGTCCAAGGTTTGTTTCATTTAGAGGAGCTTGCAATGGCACAGCAATTCCCTCCAACTCCCACCAACAACTCTGAAACGATGTTACACTATGCGAATGGGATCATGGATCTAAGCCCCATGGGTAATTATCACCATTATTCGGTCATGCCTGAAGAAAATGTCTCATTTACTAGTTTTGAAGACCTTGACATGCAAACAAACACCAGGAAATGGGCATTCCAAGACACTGAGAACCTTCAGTCAGTGGCCTTTTCCTATCTTCAGCATTCATGA 684 0.4605 MTGFGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLEHLPVTDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKAQAAQSLVNGPPSSSNPQADKFYGKFPAYSQDVQGLFHLEELAMAQQFPPTPTNNSETMLHYANGIMDLSPMGNYHHYSVMPEENVSFTSFEDLDMQTNTRKWAFQDTENLQSVAFSYLQHS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00775 227 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Eupl07g00775 227 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Eupl07g00775 227 Coils Coil 87 114 - -
Eupl07g00775 227 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00775 Eupl-Chr7 23815216 23816043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00775 7 224 AS2 family AT3G58190 54.867 1.95e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl07g00775 LOB 3.7e-36 No_clan