Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl07g00771 | ATGTCAAACCCGAAGGTCTTTTTTGACATAATGATTGGAAAGATGAAAGGTGGTCGAATTGTAATGGAACTGTTTAAGGATGTCACCCCCAAAACTGCAGAGAACTTCCGGTGCCTCTGTACAGGAGAGAAAGGGATCGGAAGATCTGGGAAGCCATTGCACTACAAGGGCTCGATCTTCCACCGCATTATCCCAAACTTCATGTGCCAGGGTGGTGATTTCACTAGGGGTAACGGGACAGGTGGGGAGTCGATCTATGGGATGAAATTTGCCGATGAGAACTTCAAGCTGAAGCACACGGGTCCTGGTGTGCTCTCAATGGCGAATGCAGGGCCCGACACAAATGGTTCACAGTTCTTTATATGCACTGAAAAGACATCGTGGCTTGATGGGAAGCACGTGGTGTTCGGGAAGATTGTGGATGGCTATAGCGTGGTTAAGGAAATGGAGAAGGTAGGTTCGGATAGCGGGACAACTTCATCTACTGTTGTGATTGAAGATTGCGGTGAGATAACAGAGAACTGA | 525 | 0.4781 | MSNPKVFFDIMIGKMKGGRIVMELFKDVTPKTAENFRCLCTGEKGIGRSGKPLHYKGSIFHRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKLKHTGPGVLSMANAGPDTNGSQFFICTEKTSWLDGKHVVFGKIVDGYSVVKEMEKVGSDSGTTSSTVVIEDCGEITEN* | 175 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl07g00771 | 174 | SUPERFAMILY | Cyclophilin-like | 2 | 171 | IPR029000 | - | |
| Eupl07g00771 | 174 | PIRSF | Peptidylpro_ismrse | 1 | 174 | IPR024936 | GO:0003755 | |
| Eupl07g00771 | 174 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 55 | 72 | IPR020892 | GO:0003755|GO:0006457 | |
| Eupl07g00771 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 118 | 130 | IPR002130 | GO:0000413|GO:0003755 | |
| Eupl07g00771 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 103 | 118 | IPR002130 | GO:0000413|GO:0003755 | |
| Eupl07g00771 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 131 | 146 | IPR002130 | GO:0000413|GO:0003755 | |
| Eupl07g00771 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 24 | 39 | IPR002130 | GO:0000413|GO:0003755 | |
| Eupl07g00771 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 60 | 72 | IPR002130 | GO:0000413|GO:0003755 | |
| Eupl07g00771 | 174 | CDD | cyclophilin_ABH_like | 4 | 169 | - | - | |
| Eupl07g00771 | 174 | FunFam | Peptidyl-prolyl cis-trans isomerase | 1 | 172 | - | - | |
| Eupl07g00771 | 174 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 14 | 169 | IPR002130 | GO:0000413|GO:0003755 | |
| Eupl07g00771 | 174 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 5 | 171 | - | - | |
| Eupl07g00771 | 174 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 7 | 170 | IPR002130 | GO:0000413|GO:0003755 | |
| Eupl07g00771 | 174 | Gene3D | - | 1 | 174 | IPR029000 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Eupl07g00771 | Eupl-Chr7 | 23699360 | 23702124 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Eupl07g00771 | 18 | 155 | U-box Gene Family | AT5G67530 | 49.640 | 1.44e-32 | 120 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl07g00771 | K01802 | - | egr:104432526 | 321.242 |