Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00755 ATGAGGAATTCTTGTCATCAGTCAATTTCAATTCCACTCATCTTCTCCCTCCCCCTTCCAGACGGAAAGATGGATTCGTTTCAGGAAGACAGAAATTGGGATCTTCTTGATTACAGCAGCATCATCGAAGATGTCACAACAACCGATTTTTATTGGAATAACGATCAGAGTGCCTGCATGGAAATTGATGCTGCACCTTCTGGCGTTGTTTCCCAACAAAAAGGATGCACACGTAAAAGGGGGCGCAATGAGTCATGCAGTGGTGTAGGGTCCAAAGCTTGCCGTGAGAAAATTCGGAGGGAGAGGATGAATGACAGGTTTGCGGACCTGAGCTCTATTTTGGAGCCTGGGAGACCTGCAAAAACTGACAAATCTGCCATACTCAGTGATGCCATCCGTGTTTTGAACCAGCTAAGGACTGAAGCTCAGGAGCTTAAAGAAGCAAATGAAAAACTTCAAGAGGACATAAAAAATTTGAAGGTAGAGAAAAACGAGATTCGTGAAGAGAAACACCTGTTGAAGGCTGATAAAGAAAGGATAGAGCAGCAGGTGAAAGCCATGACTGTTCTACCTACTGGATTTGTGCCACCACACCTGGCAACGTATCAAGCTGGAGTAAACAAGATGATGGCTGTCCCAAGCTATGGTGGATTTCCGATGTGGCAATGGATACCCCCAGCTGCCCTTGATACATCCCAAGATCATGTACTCCGGCCTCCAGTGGCTTAG 729 0.4595 MRNSCHQSISIPLIFSLPLPDGKMDSFQEDRNWDLLDYSSIIEDVTTTDFYWNNDQSACMEIDAAPSGVVSQQKGCTRKRGRNESCSGVGSKACREKIRRERMNDRFADLSSILEPGRPAKTDKSAILSDAIRVLNQLRTEAQELKEANEKLQEDIKNLKVEKNEIREEKHLLKADKERIEQQVKAMTVLPTGFVPPHLATYQAGVNKMMAVPSYGGFPMWQWIPPAALDTSQDHVLRPPVA* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00755 242 SMART finulus 93 144 IPR011598 GO:0046983
Eupl07g00755 242 Coils Coil 128 183 - -
Eupl07g00755 242 Gene3D - 91 170 IPR036638 GO:0046983
Eupl07g00755 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 138 IPR011598 GO:0046983
Eupl07g00755 242 CDD bHLH_AtILR3_like 92 167 - -
Eupl07g00755 242 PANTHER BHLH TRANSCRIPTION FACTOR 28 242 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Eupl07g00755 242 Pfam Helix-loop-helix DNA-binding domain 91 138 IPR011598 GO:0046983
Eupl07g00755 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 92 155 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00755 Eupl-Chr7 23296123 23302978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00755 76 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 60.714 3.95e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl07g00755 HLH 3.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00755 - - nnu:104600852 350.517