Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00754 ATGAAACCCTCATCGTCACCGTTCAGTCCGTTCAAGTCCAAGAAGATAATCCAGTCGAGCACGAAATCGGCTTCGTCGGATGAAATCTTTGCAACAGATCCGAATACCCCAGAGAAGCCGATGCAGCTCCAGCGACGAAGCAGAAACCGAGGTGTAGCGTTCTCAGTAAAGGACTTGAGGAAGATCGCCGAAGGGCTCAGGAAATCGGAGAAAGAAGGACCATCTGATCGAACAAATCTGATCAAAACGAGCAGGCAAACTGAAAAACAGATTGGGTCTGGGTCAAGCGTCAACCTGGTTGTTGAATCATCGAAGAAGGCCGCCGGCTCTATCAAGCTCCCCGAAAAGTATGAAATATTGGGGGAGTTCTTTGATTGCATGGAGTGTTCGATTCGGTTACTTCGTTTGAAGGGAACAATGTCGACTTTTACAAACATTTGCCCCAAAATCGAATCCTTAACCGACAGGAGGTTTTCTTATACCCATTTAGCCCAATTGAAGTACATTTTACCAGAGGCGATTGTGTTAAAGAAAGTCCTTTTGCATGATGAGCGAACGCTTTGTATGAAACCGGATCTGCAGGTCACCCTGCAAGCTGATGTGTTTGAAAATAACGGGAAAAGGAAAGCGCAAAGTGTGTATTCGAATATGAGGAAAGTGTTCCACGATCGGCTCTTGAATTTCTTCAAAGCCCATCCTGAGGGGGACGAGATTCCGGAGGAAACATTGCCAGAGCCATTTAATCAAACAAAACAAAAAATTCTTTCAAACATGAAGGAAGCCTGCATTCCCTCATTGCCTGTTGAGTCATCAGCAAATGCTCTTCCCAATCAATATTCAGCTGTAGCATCCCATATGTCTCGATCTTTTCAGAGGCGTTTTGTGGATAAGGTTCCCATTACAGAATCAGAGAAAACTCAGCTACTGTCCACTACTCTGAAGCCTTCAACCACAGTAGTACAAGACCCATGCTTTAAAGAAACTTGTCTGAATGAAAGAACTCTTAATTCTATTGTTCCATCTTTTAAATGTGTTTTCTCGAAACCACACACCATTAGGCAAGCGTCAATGTTGTGTTCTACCCCTCTTAAATTACCTCGTGTGAGCCATCTCGAAACTTGCAATGAGGAGACCAAACACATGGAGAATGAAGATTGTTCTCCAATAGAAATTGATGGCGTACAAGGGACTCCTGCAAAACAAATCTCCACTCCTGTAGGGCTGATGACCATCACGCCTGACTTACAGACGCCAAAGAGATGTCGGATTAGCCAGGATGATGATTCCACCGCGTCACCAAACAAGTTAGTGAGGCGTCTGCCCCGGAACAGGTCGTTGTTCCATACTCCCAAAAAGAATGCAAAAGCTGAGGATGAGATACACGAGATGGGAGGATCGTCAGTTGATGCGGATATTATTAAATTGCTTTCACCAGCACTTATACAATCGATTCGAGAGAAAGAGAAAAAGGCAATGGAGGATAACGATTCAGGGGTTTCTCAAGCAAAGAGGCGGCAACAGATGATTGCATGCCTGCCGAAGCTGTTCAACATGATCCACCTCATATTTCAATCAATTAAGCGTTGTGTTATTACAAAAGAGGAGCTTATGCACAAGATAATTGCAAGCAATTGCGATATAGTCGACAGAGGGGAAGTTGAAGAACAGCTGAAGTTATTGCAAGAACTAGTTCCAGATTGGATTTGGGAGAAGGTGGCATCTAGTGGGGATTATCTCTTTTGTACGAATAAGATGTCATGTCCTGAATCAATACGAAGAAGACTTGCAGAAGCTGTGTGA 1800 0.44 MKPSSSPFSPFKSKKIIQSSTKSASSDEIFATDPNTPEKPMQLQRRSRNRGVAFSVKDLRKIAEGLRKSEKEGPSDRTNLIKTSRQTEKQIGSGSSVNLVVESSKKAAGSIKLPEKYEILGEFFDCMECSIRLLRLKGTMSTFTNICPKIESLTDRRFSYTHLAQLKYILPEAIVLKKVLLHDERTLCMKPDLQVTLQADVFENNGKRKAQSVYSNMRKVFHDRLLNFFKAHPEGDEIPEETLPEPFNQTKQKILSNMKEACIPSLPVESSANALPNQYSAVASHMSRSFQRRFVDKVPITESEKTQLLSTTLKPSTTVVQDPCFKETCLNERTLNSIVPSFKCVFSKPHTIRQASMLCSTPLKLPRVSHLETCNEETKHMENEDCSPIEIDGVQGTPAKQISTPVGLMTITPDLQTPKRCRISQDDDSTASPNKLVRRLPRNRSLFHTPKKNAKAEDEIHEMGGSSVDADIIKLLSPALIQSIREKEKKAMEDNDSGVSQAKRRQQMIACLPKLFNMIHLIFQSIKRCVITKEELMHKIIASNCDIVDRGEVEEQLKLLQELVPDWIWEKVASSGDYLFCTNKMSCPESIRRRLAEAV* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00754 599 MobiDBLite consensus disorder prediction 1 42 - -
Eupl07g00754 599 PANTHER DNA REPLICATION FACTOR CDT1 2 598 IPR045173 GO:0003677|GO:0030174|GO:0071163
Eupl07g00754 599 CDD Cdt1_c 471 596 IPR032054 -
Eupl07g00754 599 FunFam CDT1-like protein a chloroplastic 469 599 - -
Eupl07g00754 599 SUPERFAMILY "Winged helix" DNA-binding domain 108 247 IPR036390 -
Eupl07g00754 599 Pfam DNA replication factor CDT1 like 113 232 IPR014939 -
Eupl07g00754 599 CDD Cdt1_m 101 251 IPR014939 -
Eupl07g00754 599 Gene3D - 469 599 IPR038090 -
Eupl07g00754 599 Pfam DNA replication factor Cdt1 C-terminal domain 480 569 IPR032054 -
Eupl07g00754 599 SMART CDT1_2 113 245 IPR014939 -
Eupl07g00754 599 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00754 Eupl-Chr7 23288458 23292162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00754 3 597 Core DNA Replication Machinery Family AT2G31270 40.753 2.33e-109 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00754 K10727 - nnu:104612476 631.713