Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00747 ATGGATTCTTCTTTCTTTCAATCCCAGAATTCTGAATTCTCGCCAGCTTCTTCCATGGGATCTCCGGATTCCTTCTCATGGGAAGGCCTTGTTTTCCGTGAAGAATCCCTTCCATTCAATGAAAATGACTCAGAAGAGATGCTCCTCTTTGGTGTTCTTGCTGAGGCCACCAAAGAACCATCAGACACCCTTTTCTCCTCTCGAATTAAGGAAGAAGAGGTTAATTCTAAGCAAAAACAAGAACCAAAGATGAAGGAGAAGTCCTATAGAGGTGTTCGAAGGCGACCGTGGGGGAAGTACGCCGCCGAGATAAGGGATTCTACTAGGCACGGATTGCGCGTTTGGTTGGGGACATTTGATAGTGCCGAAGCGGCCGCTCTTGCTTACGATCAAGCTGCGTTTTCGATGCGGGGATCGATGGCAATTCTCAATTTTCCGGTGGAACGAGTCCGTGAGTCGTTACGAGACATCAAATACGGTTGCGACGACGGATGTTCGCCTGTGGTGGCTCTGAAGAAGAGACACTCCATGAGGAGGAAAGCCATGAGCAGTAAAAACAAAGGTAGAGAGATGAGGATAGAGAATGTGGTGGAATTGGAGGATTTAGGAGCAGATTACTTAGAGGAACTCTTGAGTTCATCTGAAACTGTTTGTGTTAGTCCTTGGTGA 669 0.4709 MDSSFFQSQNSEFSPASSMGSPDSFSWEGLVFREESLPFNENDSEEMLLFGVLAEATKEPSDTLFSSRIKEEEVNSKQKQEPKMKEKSYRGVRRRPWGKYAAEIRDSTRHGLRVWLGTFDSAEAAALAYDQAAFSMRGSMAILNFPVERVRESLRDIKYGCDDGCSPVVALKKRHSMRRKAMSSKNKGREMRIENVVELEDLGADYLEELLSSSETVCVSPW* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00747 222 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Eupl07g00747 222 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Eupl07g00747 222 SMART rav1_2 88 152 IPR001471 GO:0003700|GO:0006355
Eupl07g00747 222 ProSiteProfiles AP2/ERF domain profile. 88 146 IPR001471 GO:0003700|GO:0006355
Eupl07g00747 222 CDD AP2 87 147 IPR001471 GO:0003700|GO:0006355
Eupl07g00747 222 Gene3D AP2/ERF domain 87 148 IPR036955 GO:0003700|GO:0006355
Eupl07g00747 222 Pfam AP2 domain 88 138 IPR001471 GO:0003700|GO:0006355
Eupl07g00747 222 PANTHER DNA-BINDING DOMAIN 59 213 IPR044808 GO:0003700|GO:0009873
Eupl07g00747 222 MobiDBLite consensus disorder prediction 68 89 - -
Eupl07g00747 222 FunFam Ethylene-responsive transcription factor 2 87 148 - -
Eupl07g00747 222 SUPERFAMILY DNA-binding domain 88 148 IPR016177 GO:0003677
Eupl07g00747 222 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00747 Eupl-Chr7 23026143 23026936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00747 1 216 AP2-EREBP Transcription Factor Family AT3G23240 57.014 2.41e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl07g00747 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00747 K14516 - nnu:104610030 343.584