Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00727 ATGAGCACTCCTCTCTCATCCGATCTTCGTAGCAAATACAATGTATTGTCGGTCCCAATCCGCAAAGACAACGAGGTTCAGGTCTTTTGTGGAACTTACAAGGGCCAAGAAGGGAAGGGCATTCAGGTCTACCGTCGTAAGTGGGTGATCTACATCGAGAAGATCACTATAGATTTTTAA 180 0.45 MSTPLSSDLRSKYNVLSVPIRKDNEVQVFCGTYKGQEGKGIQVYRRKWVIYIEKITIDF* 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00727 59 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 1 58 IPR005756 GO:0003735|GO:0006412|GO:0015934
Eupl07g00727 59 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 57 IPR005756 GO:0003735|GO:0006412|GO:0015934
Eupl07g00727 59 SUPERFAMILY Translation proteins SH3-like domain 1 57 IPR008991 -
Eupl07g00727 59 NCBIfam 50S ribosomal protein L24 1 57 IPR005756 GO:0003735|GO:0006412|GO:0015934
Eupl07g00727 59 Gene3D - 1 59 IPR014722 -
Eupl07g00727 59 CDD KOW_RPL26 23 57 IPR041988 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00727 Eupl-Chr7 22507137 22507504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00727 1 56 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 75.000 1.74e-27 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00727 K02898 - nnu:104590385 93.9745