Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00708 ATGGGGACAGAATGTATAAGAGCCCGTATTAAAGAAGAGAAAGTTGAGAATCCGTCAGTTCCACCTGGTTTTGTGTCACTTACATCCTTCACCTTAAAGAAGATAGATGATAATGAAGTCATGATGAGTTGCATGGCCTCTCCGGGTGCTTCCGAATCACAGCCAACCCAGATGGACACCGAGTGTGATAACAGTGATGATGTGAAGCGATCCCTTAGGCGTAGACCATGGATAAACTACAGCCAATTTGATAATAGTTCGGAGGAGGAATCCGACTCTGAGCAGTTTGATCAGAATGTCCCTTCAAAACCTCGCCTTCCAAAAGGTGTTGTCCGTGGATGTTTAGAATGTAGTAACTGCCAAAAGGTCACAGCAAGGTGGCATCCAGAAGATGCATGCAGGCCTATCCTTGAGGAGGCTCCTGTATTCTACCCAACTGAAGAGGAATTCAAAGATACACTAAAGTATATCGCGAGCGTACGGTTGAGAGCAGAGCCATATGGAATTTGTCGCATTGTTCCTCCCTCTTCGTGGAAACCTCCTTGTCCTCTTAAGGAAAAGAACATATGGGAAAATTCTAAATTTGCCACTCGTGTACAACGAGTTGACAAGCTTCAAAATCGGCATTCAATGAGAAAAATGTCTAGAATTTATAGCACTATGAAGAGGAAAAGGAGAAAATGCGAGGGAATGGGGGTGGACTGTGGGATTGGTAATGGGGATGTCACAGGACCTAACGAGGCCGAGAGGTTTGGGTTTGAACCTGGTCCGCTGTTCACTCTGGAAGCCTTTCATAAGTATGCAAAAGATTTCAAGGGACAGTATTTTCGGGAGACAGACAAGGGCACAGATTCAGGAGATAATCAGAGCGTGCTTCAAAATCAGTGGGAACCTTCTATAGAGAATATTGAGGGTGAATATTGGCGGATGGTTGAGAAACCAACTGAAGAGATTGAGGTACTTTATGGGGCCGATTTAGAAACTGGAGTTTTTGGCAGCGGCTTTCCGAAAGTGTCCTCTCCACTGGAGCGTTCTAATTATGATGAAAAATATTTGAAATCAGGTTGGAACTTGAATAACTTCCCCAGGCTTCCGGGCTCTGTGCTGGCTTTTGAAGGCGGTGACATTTCTGGTGTTCTAGTGCCATGGTTGTATGTAGGGATGTGCTTTTCATCATTTTGTTGGCATGTTGAGGACCACCACTTCTACTCGATGAATTACATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTTCCAGGGAGAGATGCCCTCAAGTTGGAGGCGGCTATGAAAAAGTATTTGCCAGACTTATTCGAAGAACAGCCCGACTTGCTTCATAAGCTTGTAACACAGCTCTCACCTTCCATATTGAAGTCTGAGGGGGTACCCATCTACCGGTGTGTTCAGAATGCCGGGGAGTTTGTTCTAACCTTCCCCCGAGCATATCATTCGGGATTCAATTGCGGCTTCAATTGTGCAGAGGCTGTAAATGTAGCCCCCGTTGACTGGTTGCCTCACGGGCAGAATGCTGTAGAGCTCTACCGTGAGCAGAGACGTAAGACGACTGTTTCCCACGATAAGCTGTTGCTAGGGGCAGCAAGGGAAGCTGTGAGGGCAGATTGGGAACTCCAATTACTGAGGAAGAACACCTCAGATAACTTAAGATGGAAAGATGTCTGTGGAAAGGATGGGATCTTAGCAAAGGCACTCAAGACACGTGTTGAGATGGAGCATACAAGGAGGGAATACCTTTGCAACTCTTCACAGTCAGTGAAGATGGACATCAGCTTTGATGCGAACTGCGAACGGGAATGCCGCATATGTCTCTATGATTTGCATCTGTCAGCAGTAGGTTGTCAGTGTTCCCCAGAAAGATTTGCGTGCCTGAATCATGCGAAGCAGCTATGCTCATGTGCTTGGAGTTCCAAAACTTTTCTCTTCCGTTATGAAATCAATGAATTAAATATTCTTGATGAAGCTTTGGGAGGGAAATTAAGTGCAATCTACAGATGGGCAAAATTAGATCTTGGACTGGCTCTCAGTTCCTATGTCTCCAAAGACAGCTTACAAGTACCTCGACCCATTTGTAAACCATCCCATTCCTCAGATGGAGCAAAACTAAAAGAGCACGGATCGCTGGATGCAGTAACTTCCACCAGTGTTGCTGGGATTCCTCCTAGATTGTTCCAAGAAATCAAGGCACCTGTTGTCCAACTACCCTTAAATAATCGTATTGGTAAACCATCCCATTCTTTAGAAGGAGCAAAACAAAAAGAGCATGGATTACTAGATGCAGTAACTTCCACAACTTTTGCTTGGGGTCCTACTCCTAGATTATATCAAGAAACCAAGGCACCTGTGGTCCAGGTACCATCCTTGAAAGAACTGAGAGAACGGCCTAACACTGTCAATTCAACTCATATCACAGCTGATACCTCTTCATTACAAAAAGAGAAACCATCGGAAGTTGTGTTGGCATTGGCTTCTAAAGATTGGAAGGAGTTATATTTACCAGGTAGATCTTCACATGACAAAGAAATAGCAGATCATAGCGTTCAGGTCAGGGTAGAAGGGTGCCTTGATTCTCGTTCCAATTTGTTAAGCTCCCCTGTTTGTCAGCTATCTCAAGAAGACATGTCATACACACAGCTCCCACTAGGCACATCTAGTGAACAGAACTCTCTGAAATGCTCTACCTCTGTTCAGAGAGAGAATCTGTTGAGCAACTTGGTTACAGTGGAACCTAAAAGAAACAAGTCTTTATCATCAGGAGACAGTCATATTATACTTCTCAGTGATGATGAAGGTGAGGAGCCTTGTAGGATGCTTTCAAATAGGCACACTGGAGAATCTTCTGCAAAGTACCCTGAAGTTTCTGCAAGGTTGGCAAAGTATGATGATAATGTGAGTCCGTGTAATTATCAGAAAGATCAAGTCTTGGATACACCCGAGACTAATGCATCGGTGATGAGTGAAGGGGATATAAATTTGACACCTGATGTGGAAAAGGAGGATCTTCCCTTGCATCCAATGTGTGTAAAAGTTGAAGAACATGAGAAACATGAAAGATGCACGGAATACAGCTTCATGGTGGGATCTTTCCCTCATAACCTATCTTGCAAAGTAGGATCTGCAGGCACAGGTTTTGTAAAAGCTACCCAGGATCTCTTATCCACAGGAGAACCTGGTGATTGTAATATATCAAATGTTGGGAGTCTCCTTCAGCATCCACTGCTATATGGAAGTGGTAAACCAAACAGTGAGGATAAAGATGAAAATATAGGATTGTACTCCAATTCAAATTTAACGGATAAGGCAAGGCCTGTGACAGGTGGTGTATCTTGTGCCCCGAATAATCTAGACAGATATTATCGTCAGAAAGGTCCTCGCATTGCAAAGGTGGTGCGGAGGATAAACTGCAATGTTGAGCCTCTGGAATTTGGGGTCGTGCTTTCTGGAAAGTTGTGGTCAAGCTGCCAGGCCATATTCCCCAAGGGATTCAAAAGTCGGGTCAGTTATTTCAATTTGCTAGATCCGGCAAAAATGTGTTATTACATCTCAGAAATATTGGATGCAGGACTGCTCAGGCCTCTGTTTATGGTTACAGTAGAGCAATGTCTGACTGAGGTATTCATACACATCTCGGCTGCCAAATGCTGGGACATGGTGAGAGAGAGAGTGAATCAAGAAATAAGGAAACAACATAACTTGGGGAGAATGAAGCTTCCCCCTTTACAGCCTCCAGGGAGTCTCGATGGTCTTGAAATGTTTGGATTCTCTTCACCAGCAATCATTCAGGGTATAGAGGCAATTGACCAGAATAGGGTTTGTACAGAGTACTGGAAATCCAGGCCACAAACCCAGAACTCACACTCCTTGCCTGGAAACTTTGCTGGAGATCATAACCTGAGAACCAAGGAGCCAAATGATCAAGAGGTCAAGGACAGCATCATGACCCGTCCATCACCCATTGGAGTTGATATAGTACTCAAGGGCCTTTTCAAGAAGGCCAACCCAGAAGAACTACACTCACTGTACAGCGCATTGAGCGATAATGAATCAACTGCTGATCAAGGACTGGTGACTCGGCTTCTCAGTGAAGAGATTCAGAACCGCCCAATATAA 4128 0.4453 MGTECIRARIKEEKVENPSVPPGFVSLTSFTLKKIDDNEVMMSCMASPGASESQPTQMDTECDNSDDVKRSLRRRPWINYSQFDNSSEEESDSEQFDQNVPSKPRLPKGVVRGCLECSNCQKVTARWHPEDACRPILEEAPVFYPTEEEFKDTLKYIASVRLRAEPYGICRIVPPSSWKPPCPLKEKNIWENSKFATRVQRVDKLQNRHSMRKMSRIYSTMKRKRRKCEGMGVDCGIGNGDVTGPNEAERFGFEPGPLFTLEAFHKYAKDFKGQYFRETDKGTDSGDNQSVLQNQWEPSIENIEGEYWRMVEKPTEEIEVLYGADLETGVFGSGFPKVSSPLERSNYDEKYLKSGWNLNNFPRLPGSVLAFEGGDISGVLVPWLYVGMCFSSFCWHVEDHHFYSMNYMHWGAPKMWYGVPGRDALKLEAAMKKYLPDLFEEQPDLLHKLVTQLSPSILKSEGVPIYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQNAVELYREQRRKTTVSHDKLLLGAAREAVRADWELQLLRKNTSDNLRWKDVCGKDGILAKALKTRVEMEHTRREYLCNSSQSVKMDISFDANCERECRICLYDLHLSAVGCQCSPERFACLNHAKQLCSCAWSSKTFLFRYEINELNILDEALGGKLSAIYRWAKLDLGLALSSYVSKDSLQVPRPICKPSHSSDGAKLKEHGSLDAVTSTSVAGIPPRLFQEIKAPVVQLPLNNRIGKPSHSLEGAKQKEHGLLDAVTSTTFAWGPTPRLYQETKAPVVQVPSLKELRERPNTVNSTHITADTSSLQKEKPSEVVLALASKDWKELYLPGRSSHDKEIADHSVQVRVEGCLDSRSNLLSSPVCQLSQEDMSYTQLPLGTSSEQNSLKCSTSVQRENLLSNLVTVEPKRNKSLSSGDSHIILLSDDEGEEPCRMLSNRHTGESSAKYPEVSARLAKYDDNVSPCNYQKDQVLDTPETNASVMSEGDINLTPDVEKEDLPLHPMCVKVEEHEKHERCTEYSFMVGSFPHNLSCKVGSAGTGFVKATQDLLSTGEPGDCNISNVGSLLQHPLLYGSGKPNSEDKDENIGLYSNSNLTDKARPVTGGVSCAPNNLDRYYRQKGPRIAKVVRRINCNVEPLEFGVVLSGKLWSSCQAIFPKGFKSRVSYFNLLDPAKMCYYISEILDAGLLRPLFMVTVEQCLTEVFIHISAAKCWDMVRERVNQEIRKQHNLGRMKLPPLQPPGSLDGLEMFGFSSPAIIQGIEAIDQNRVCTEYWKSRPQTQNSHSLPGNFAGDHNLRTKEPNDQEVKDSIMTRPSPIGVDIVLKGLFKKANPEELHSLYSALSDNESTADQGLVTRLLSEEIQNRPI* 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00708 1375 Gene3D Cupin 125 500 - -
Eupl07g00708 1375 ProSiteProfiles JmjC domain profile. 350 516 IPR003347 -
Eupl07g00708 1375 MobiDBLite consensus disorder prediction 43 68 - -
Eupl07g00708 1375 SMART cupin_9 350 516 IPR003347 -
Eupl07g00708 1375 Pfam JmjC domain, hydroxylase 383 499 IPR003347 -
Eupl07g00708 1375 ProSiteProfiles FYR domain FYRN motif profile. 1135 1193 IPR003888 GO:0005634
Eupl07g00708 1375 SMART JmjN_1 139 180 IPR003349 -
Eupl07g00708 1375 Pfam jmjN domain 141 174 IPR003349 -
Eupl07g00708 1375 Pfam F/Y rich C-terminus 1197 1284 IPR003889 GO:0005634
Eupl07g00708 1375 MobiDBLite consensus disorder prediction 83 104 - -
Eupl07g00708 1375 ProSiteProfiles FYR domain FYRC motif profile. 1195 1286 IPR003889 GO:0005634
Eupl07g00708 1375 SUPERFAMILY Clavaminate synthase-like 257 544 - -
Eupl07g00708 1375 Gene3D - 1142 1279 - -
Eupl07g00708 1375 MobiDBLite consensus disorder prediction 47 61 - -
Eupl07g00708 1375 FunFam Putative lysine-specific demethylase JMJ16 1141 1279 - -
Eupl07g00708 1375 SMART fyrc_3 1199 1295 IPR003889 GO:0005634
Eupl07g00708 1375 Pfam F/Y-rich N-terminus 1148 1190 IPR003888 GO:0005634
Eupl07g00708 1375 SMART fyrn_3 1149 1193 IPR003888 GO:0005634
Eupl07g00708 1375 MobiDBLite consensus disorder prediction 1286 1313 - -
Eupl07g00708 1375 ProSiteProfiles JmjN domain profile. 140 181 IPR003349 -
Eupl07g00708 1375 Pfam C5HC2 zinc finger 606 656 IPR004198 -
Eupl07g00708 1375 PANTHER LYSINE-SPECIFIC DEMETHYLASE 134 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00708 Eupl-Chr7 21771007 21790767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00708 1 692 JUMONJI Transcription Factor Family AT1G08620 64.507 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl07g00708 JmjC 1.8e-45 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00708 K11446 - nnu:104600888 1731.84