Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00707 ATGGGTTTAAGGGACATAGAGGCAACACTGCCTCCAGGGTTTAGGTTTAACCCTAGTGATGAAGAGTTAGTCTGCCATTATCTCTCCAAAAAGATTGCTAACCAGAGACCATCAAAGGGGACCATGGTGGAGGTAGATTTGCATACTTGTGAACCCTGGCAGCTACCAGATGTGGCTAAGCTTGGTGCCAATGAATGGTACTTCTTCAGCATTCGTTATCGGAAGTATGCGACCGGGTTTCGTGCCAATCGAGCCACGGCATCTGGATACTGGAAAGCCACAGGGAAAGATCGGATGGTGTGTGATCCAACCACCCATGCAATCGTGGGGATGCGAAAGACATTAGTTTTCTACTTCGGGAGAGCTCCAAAGGGGATCAAGTCTGGCTGGATCATGCATGAGTTCCGTCTAGAGAACCCACATATGCCTCCTAAGGAAGACTGGGTGCTATGTAGAGTATTTCAGAAAGGAAAGGAAGAGACGAGCACGAAACTTAGCCTAGAAAATGAATTCGGTCTCTCATCTCCAAATTGTTCATCATCCCTTCCTCCTGTAATTGACCAAACCATGGCAAGTTTCCCAGAAATGATCCCAAACTATGATCAGGACAACAATCAGAGCAGTAACTTACTAAATTTAGCTGATCATCATCATCAGCAGATGAACAACAGAGCCATCAATGAGATCAACTCAAGAAGTGGAGATGAGTGTGGATTTCTATTCCATATGAGCTTAGATGAAATGGGGTTTGAGGACGACAACGTCGTCACTACCATTTTTTCTTAG 786 0.4529 MGLRDIEATLPPGFRFNPSDEELVCHYLSKKIANQRPSKGTMVEVDLHTCEPWQLPDVAKLGANEWYFFSIRYRKYATGFRANRATASGYWKATGKDRMVCDPTTHAIVGMRKTLVFYFGRAPKGIKSGWIMHEFRLENPHMPPKEDWVLCRVFQKGKEETSTKLSLENEFGLSSPNCSSSLPPVIDQTMASFPEMIPNYDQDNNQSSNLLNLADHHHQQMNNRAINEINSRSGDECGFLFHMSLDEMGFEDDNVVTTIFS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00707 261 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 217 - -
Eupl07g00707 261 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Eupl07g00707 261 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Eupl07g00707 261 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Eupl07g00707 261 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00707 Eupl-Chr7 21760523 21764195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00707 6 222 NAC Transcription Factor Family AT1G56010 48.673 4.11e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl07g00707 NAM 2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00707 - - ming:122092116 327.791