Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00687 ATGGCCTGCAAGACTCTTAATATAAACTCCCTCACCACAAACCTTCTACTCCTCCCCCTATATCCTCTCATTCTTGAAATTCCATGCAGAAGTAAAAGAAAACTGGAAGAAGCAGAAGAAACAAATACCATGATGAAAGGAGAATTCGAAGTAGTTCATGGGGCTCTTGATTTAATCCAACCCCATGAACAATGGGAATGCAATAATGTCGGATTTTCTGCTGGTTCCCATCATCAAACAGTGAGGCCACTGATTGATAATCGGTACGGTAATAACACGGAGAGGTTCGAGCTCTCGGAGTGGATGGAGCATGTCGCGAAGCAGCTCTCGGACTCGCCGGAGACTGGCGCCGCAGAGAGTTTTCAGACAGAAACATTAGCGTCGGAAGAGAACTTTTCCGCCGTGCCTTCTATAGGTGACTTTAGACCTCGGAAAACTGCCAGACGACACTATGGTGATGGTCAAGGAGAGGAGATTCAATGGAGCAACTTCAATGAGAATGGAGGGAGCAGAGGATTGAATAGGTTAGATGAACATGGGTTGAGTATGCTAACACTTCTTCTCGAGTGTGCTGTTGCTATCTCTGTCGACAATTTGGGTGAGGCTCATAGGATGTTGCTTGAGCTCAATCAAATGGCCTCTCCTTATGGACCATCATGTGCTGAGAGGGTAGTGGCTTACTTTGCTAAGGCCATGGCTAGTAGAGTCATGAACTCTTGGCTAGGTATTTGCACCCCTTTGATCAACCACAAGAGCATTCATTGTGCCTTCCAAGTCTTTAATAACATCTCCCCTTTCATCAAATTTGCACACTTTACATCTAACCAAGCTATCCTAGAAGCTTTCCATCAAAGGGAGAGGGTTCACATCATTGACCTAGACATCATGCAAGGGTTGCAATGGCCTGCTCTATTCCATATCCTCGCTACCAGGATCGAGGGTCCCCCACATGTTCGGATGACGGGAATGGGCACGTCGATGGACCTCTTGTTGGAAACAGGGAAGCAACTCTCCAATTTCGCAAAGCGGTTAGGTATGTCATTCGAGTTCCACCCAATAGCGAAGAAGTTCGGTGACATTGATCCTTCAATGGTTCAACTGCGACGAGGGGAGACCGTCGCTGTGCATTGGCTTCAACACTCATTATATGATGCCACCGGACCTGATTGGAAGACAATGAGGCTACTTGAGCAATTAGCACCAAGAGTGATCACATTGGTTGAGCAGGATATCACACATGGGGGATCCTTTCTCGACCGCTTCGTCGGATCTCTCCACTACTACTCTACCATCTTTGATTCTCTAGGCGCTTCATTGCCATGTGATGACCCTAGTCGCCATCGCATCGAGCACTGCCTACTCTACAGGGAGATGAACAATATACTCGCTATCGGAGGTCCAGCTCGCAGTGGCGAGGACAAATTCAACCATTGGCGAACGGAACTCGTGCGTCATTGCTTTGCACAGGTACCCATGAGTGGCAACTCCATGGCTCAGGCGCAGCTTATCCTCAACATGTTCCCTCCATCACATGGTTATACCCTTGTGCAAGGAGATGGCACTCTTAGGCTTGGATGGAAAGATACCAGCTTGTACACTGCTTCTGCTTGGACTTCACATGCTTCTACATAG 1632 0.4773 MACKTLNINSLTTNLLLLPLYPLILEIPCRSKRKLEEAEETNTMMKGEFEVVHGALDLIQPHEQWECNNVGFSAGSHHQTVRPLIDNRYGNNTERFELSEWMEHVAKQLSDSPETGAAESFQTETLASEENFSAVPSIGDFRPRKTARRHYGDGQGEEIQWSNFNENGGSRGLNRLDEHGLSMLTLLLECAVAISVDNLGEAHRMLLELNQMASPYGPSCAERVVAYFAKAMASRVMNSWLGICTPLINHKSIHCAFQVFNNISPFIKFAHFTSNQAILEAFHQRERVHIIDLDIMQGLQWPALFHILATRIEGPPHVRMTGMGTSMDLLLETGKQLSNFAKRLGMSFEFHPIAKKFGDIDPSMVQLRRGETVAVHWLQHSLYDATGPDWKTMRLLEQLAPRVITLVEQDITHGGSFLDRFVGSLHYYSTIFDSLGASLPCDDPSRHRIEHCLLYREMNNILAIGGPARSGEDKFNHWRTELVRHCFAQVPMSGNSMAQAQLILNMFPPSHGYTLVQGDGTLRLGWKDTSLYTASAWTSHAST* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00687 543 ProSiteProfiles GRAS family profile. 174 538 IPR005202 -
Eupl07g00687 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 125 534 IPR005202 -
Eupl07g00687 543 Pfam GRAS domain family 184 538 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00687 Eupl-Chr7 21210741 21212372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00687 175 541 GRAS Transcription Factor Family AT3G54220 57.219 5.06e-146 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl07g00687 GRAS 2e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00687 - - pvy:116143161 786.178