Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00686 ATGGAGCATGTGATCGGCGGAAAGTTCAAGCTTGGCCGGAAAATCGGGAGTGGATCTTTTGGTGAGCTTTATCTAGGTGTTAACATACAAAGTGGAGAGGAGGTTGCTATAAAGCTGGAATCTGTGAAGACCAAGCACCCTCAGCTTCACTATGAATCAAAGTTGTATATGCTCCTTCAAGGAGGAACGGGAATTCCCCAGCTGAAGTGGTTTGGAGTCGAGGGCGAGTACAATGTTATGGCTATTGATCTTCTTGGGCCAAGCCTGGAAGATTTATTCAACTACTGCAATCGAAAGTTGACATTAAAAACAGTTCTGATGCTTGCAGATCAGTTAATTAACAGAGTTGAGTACATGCATTCGAGGGGTTTTCTTCACCGTGATATCAAGCCTGACAACTTCTTAATGGGTTTGGGGCGCCGAGCAAATCAGGTATATATCATTGACTATGGCCTTGCAAAAAAGTATAGGGATCTTCAAACCCATAAGCACATACCATACAGGGAAAACAAGAATCTCACAGGAACAGCTCGCTATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGGAGAGATGATCTGGAGTCTCTTGGTTACGTGCTTATGTATTTTTTAAGGGGAAGCCTTCCATGGCAGGGGTTGAAAGCTGGAACTAAAAAGCAGAAGTATGATAAAATCAGTGAAAAGAAGATGCTAACTCCCATAGAGGTGCTTTGCAAATCATATCCATCAGAGTTTATATCATATTTCCATTATTGTCGATCGCTGCGCTTTGATGACAAACCAGATTACTCATATCTGAAAAGGCTTTTCCGTGACTTGTTTATTCGAGAAGGTTATCAATTTGACTATGTATTTGACTGGACTATATTGAAATACCCTCAGATTGGTGTTTCTAGAACAAGGGTGAGTGCTGTAAAAATTTATGGTGTGGATTCTTATCCTCCCATGCATGTTTCTTATAATTATTGTTATTATTATCATTATTATTTTGTCCATTTTCAGCTACCTAGTGGCAAGATAGGTGTAAATCCAGGACCAACTGCAGAAAGGACTTCAGTGGGACAAGAGATTCGTGATAGATTTTCTGGTGCAGTCGAAGCTTTTGCCAGAAGAAACAGTTCAGGTTCTGGTCTACAGGGTGATCACTCCAAGCACAAGAATTCGGAGGATGCACCATCATCCAAGGAGGTGATACCTGATTCCGAAAGAGGCCGCACCTCTTCCTCTAGGAATGGCAGCACTTCAAAGAGAGCTGTTGTCTCAAGCAGCCGGCCAAGCTCCTCTGGTGAGCCCAGTGAGAGTCGCTCAAGTCGGCTAGCCTCAGGCAGCGGCCGCCTGTCCACCACCCAAAGGGTACAACCCGGGTTCGAGTCCAAATCATCGTCCCTCTTACGTACCACAGGTGCAAGAGCTGCCCGTGATGATCCTATTCGGAGCTTTGAGCTCCTCTCAATCGGCACAGAGAAGAGGAAGTAA 1485 0.4424 MEHVIGGKFKLGRKIGSGSFGELYLGVNIQSGEEVAIKLESVKTKHPQLHYESKLYMLLQGGTGIPQLKWFGVEGEYNVMAIDLLGPSLEDLFNYCNRKLTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRRANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFISYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGVSRTRVSAVKIYGVDSYPPMHVSYNYCYYYHYYFVHFQLPSGKIGVNPGPTAERTSVGQEIRDRFSGAVEAFARRNSSGSGLQGDHSKHKNSEDAPSSKEVIPDSERGRTSSSRNGSTSKRAVVSSSRPSSSGEPSESRSSRLASGSGRLSTTQRVQPGFESKSSSLLRTTGARAARDDPIRSFELLSIGTEKRK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00686 494 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00686 494 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00686 494 CDD STKc_CK1_delta_epsilon 8 282 - -
Eupl07g00686 494 MobiDBLite consensus disorder prediction 407 470 - -
Eupl07g00686 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Eupl07g00686 494 PANTHER CASEIN KINASE-RELATED 8 430 - -
Eupl07g00686 494 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Eupl07g00686 494 FunFam Casein kinase 1-like protein 1 320 - -
Eupl07g00686 494 FunFam Putative Casein kinase I 1 85 - -
Eupl07g00686 494 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Eupl07g00686 494 MobiDBLite consensus disorder prediction 374 494 - -
Eupl07g00686 494 MobiDBLite consensus disorder prediction 385 406 - -
Eupl07g00686 494 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00686 494 Gene3D Transferase(Phosphotransferase) domain 1 1 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00686 Eupl-Chr7 21150884 21171522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00686 11 281 MAP Kinase Kinase Kinase AT1G62400 26.950 2.06e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Eupl07g00686 Pkinase 3.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00686 K08960 - ming:122069335 779.245