LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl07g00679	ATGCCTTTCAAGCGATACGTGGAGATCGGGAGGGTCGCTCTCGTGAATTATGGGAAAGATTATGGAAGGCTCGTCGTGATCGTCGACGTTATCGATCAAAATCGGGCTCTTGTTGATGCCCCTGATATGGTGAGAAGCCAAATGAATTTCAAGAGACTCTCACTTACGGACATCAAGATTGACATCAAAAGGATCCCGAAAAAGAAGTCTTTGATTGAGGCCATGGAGGCTGCAGATGTCAAGAACAAATGGGAGAACAGCTCCTGGGGCAGGAAGCTGATCGTGCAGAAAAGAAGGGCTTCTCTCACTGATTTTGATAGGTTCAAGCTCATGTTGGCAAAGATCAAGAGAGGTGGAGTGATCAGGCAAGAGCTTGCGAAGCTGAAGAAGCAGACTGCCGCTTGA	405	0.4765	MPFKRYVEIGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRIPKKKSLIEAMEAADVKNKWENSSWGRKLIVQKRRASLTDFDRFKLMLAKIKRGGVIRQELAKLKKQTAA*	135

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl07g00679	134	PANTHER	60S RIBOSOMAL PROTEIN L14	1	131	IPR039660	GO:0003723\|GO:0003735
	Eupl07g00679	134	Gene3D	-	1	84	IPR014722	-
	Eupl07g00679	134	FunFam	60S ribosomal protein L14-1	1	84	-	-
	Eupl07g00679	134	SUPERFAMILY	Translation proteins SH3-like domain	5	93	IPR008991	-
	Eupl07g00679	134	Gene3D	-	92	127	-	-
	Eupl07g00679	134	Pfam	Ribosomal protein L14	45	117	IPR002784	GO:0003735\|GO:0005840\|GO:0006412
	Eupl07g00679	134	CDD	KOW_RPL14	7	79	IPR041985	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl07g00679	Eupl-Chr7	20935835	20938918	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl07g00679	1	134	Cytoplasmic Ribosomal Protein Gene Family	AT4G27090	83.582	2.80e-79	228

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl07g00679	K02875		-	vvi:100264927	242.662

Showing 1 to 1 of 1 entries