Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00675 ATGCAGATAATGGATGGAAATGCGGAGATTGTAAAAGTTTTCACCCTGGAAGTAGACACCTCTGACACCATAGAAGACGTCAAAGCTAAGGTTCAAGACATGGAAGTGTTACTTGCAGAAAATTACGAGCTCTACTACTACAAAGGTTGCAACCTTGACAGGACCACGAGTACTATTACTGTAGAAGGTCATAACATTGTGGAGGGGTCAACACTCTACCTTGTACTCCATCCCATGGAGATCTTCGTGGAAATAGAAGATGGATACGACTGTGTACAGTGTCAAGGCCAAGATTCATGGCGTGCATGGGATCCATCCAAACTACCAGAAGCTCGTTTTTGGAGGAAAAGACCTTAA 357 0.437 MQIMDGNAEIVKVFTLEVDTSDTIEDVKAKVQDMEVLLAENYELYYYKGCNLDRTTSTITVEGHNIVEGSTLYLVLHPMEIFVEIEDGYDCVQCQGQDSWRAWDPSKLPEARFWRKRP* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00675 118 CDD Ubl_ubiquitin_like 12 75 - -
Eupl07g00675 118 Pfam Ubiquitin family 12 77 IPR000626 GO:0005515
Eupl07g00675 118 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Eupl07g00675 118 Gene3D - 4 81 - -
Eupl07g00675 118 SUPERFAMILY Ubiquitin-like 12 79 IPR029071 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00675 12 77 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 42.424 3.85e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00675 K08770 - smeo:124379084 52.7582