Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00653 ATGGGAGGTAACAAATGGATGAAAGGGCGGGGAATCCGTGTTAGACCCAGGTTGGGTAAGATAATGAAGTGCCTTTATACAGCAGAGCAGTTAAGAACAGATGAAATGGTTCCCTCATCCGAGTCCCTGGCGACCAGGGACTATTCGGTTAGTGGGTATTCTTCTCGAACTGGTGAGGGTGAACAGAGGTCTGATATTGGCAACATCGAAGAAGCCGAGTCATCTCTTCGTGAGAGTGGTTGTCTGAACTATGAGGAGGCGAGAGCATTGTTAGGAAGGCTTGAGTATCAAAGAGGGAACATTGAAGCTGCTCTTCATGTATTTGAAGGAATAGATATCGCTGCTGTGACTCCCAAGATGAAACTCTCCCTTGCAAGAAGAGGCGAATGCCACAAGCGCCATTCCCACGGTGATGCTGCTCCACCCATGTCTATGCATGCCATTAATTTACTCTTTGAAGCGATCTTTCTCAAAGCAAAATCATTGCAGGCCCTTGGGAGATATAAAGAAGCTGCTCAATCATGCAAAGTTATTCTGGACACTCTTGAATCTGCATTACCAGAAGGTTTGCCTGAAAACTTTGGCACTGATTGTAAATTGCAGGAGACTCTAAACAAGACAGTTGAGTTGCTTCCAGAGTTTTGGAAACTTGCTGGCTTTCCCCATGATGCAATCTTGTCTTACCGGCGGGCCCTCCTCCATCTCTGGAACCTTGACAAGGATACCACTGCAAGAATACAAAAAGAGTTTGCCATTTTTCTTCTCTATGGTGGTAGTGACGCTAGCCCCCCAAACCTCCGTTCCCAACTTGAAGGATCCTTCGTACCTAGGAACAATATTGAAGAAGCTGTTCTTCTTTTAATGATTCTTTTAAGGAAATTTTCTCTCAAAAAGATTGAAAGGGACCCATCAATCCTTGATCATCTTTCCTTTGCATTGTCCGTGTCAGGGGAACTAAGGGCGTTAGCTAGTCAGGTTGAAGAATTGGTGCCTGGGATTTTGGATAGAAAAGAAAGATATTACACACTTGCTCTGTGTTACTATGGGGAAGGTGAGGACTTAGTTGCTTTAAATCTACTGAGGAAACTATTCAGTAGCAGTGAGAGTCCAAATTGCATACAGCCATTAATACTTGCCTCAAAGATTTGCGGGGAGAACCCTACTTACGCAGAAGAAGGAGTTGCTTTTGCACGTATGGCGCTTTCCAGCTTGCAGGGAGAATGCAATCAGATGGGAAGTCTCGCCAATTGCTTACTAGGTGTCTCAATGTCAGCACAGGCCAGATCAGTCCTGTCTGATTCTGAGAGGATTACTAGAAAGTATGATGCACTTGAGGCACTAGAAACTGCTGAAAAAGAAATGAAAGAAAGAGATCCTAAAGTTATATTCCATCTCAGCCTAGAAAATGCTGAGCAGAGGAAGTTGGATGTTGCACTTTATTATGCAAAGGAGTCGCTGAAACTGGAAGCTGGATCTAATGTTAAAGGGTGGATCCTGTTGGCTCGAATATTATCAGCTCAGAAACGGTTTATGGATGCTGAGAATATCATTAGTGCTGCTCTGCATCAGACTGGGAAGTGGGATCAAGGAGAACTGTTGCGAACTAAAGCTAAACTCCAGATTGCTCAGGGACAATTAACGAATGCCATTGAGACATATACTCATCTTCTTGCTGTTCTTCAAGTTCAGAGTAAAAGCTCTGGAGTTGGGAAAAAGCTTCTGAAGGATAGTGGCAACAATGATGGAAGTTTGGAACTAGAAACATGGCATGACCTGGCTAATGTCTACACAAGCTTGTCACAGTGGCGGGATGCCGAGGTCTGTCTCTCCAAATCAAAGGCCATCACTCCTCATTCTGCTTCTAGGTGGCATGCCACAGGTCTGCTCTATAAAGCAAAAGGTTTCCACAATGAAGCTCTTAAAGCATTTGCAAACGCGTTGGATGCTGAACCTACCCATGTCCCAAGCTTGGTCTCTGCAGCTACTGTTCTCAGACAGCTTGGTGACCAGTCATTGACAGTTGTTAGAAGTTTTTTAACAGATGCACTGCGGCTAGACAGAACAAACCCTTCTGCTTGGTACAATCTTGGACTGCTTTACAAAACCGAGGGTGGTGCATCAACAATAGAAGCTGCCGAATGTTTTGAAGTTGCAAATCTTCTTGAAGAATCTGCACCAGTTGAGCCCTTCAGATGA 2196 0.4449 MGGNKWMKGRGIRVRPRLGKIMKCLYTAEQLRTDEMVPSSESLATRDYSVSGYSSRTGEGEQRSDIGNIEEAESSLRESGCLNYEEARALLGRLEYQRGNIEAALHVFEGIDIAAVTPKMKLSLARRGECHKRHSHGDAAPPMSMHAINLLFEAIFLKAKSLQALGRYKEAAQSCKVILDTLESALPEGLPENFGTDCKLQETLNKTVELLPEFWKLAGFPHDAILSYRRALLHLWNLDKDTTARIQKEFAIFLLYGGSDASPPNLRSQLEGSFVPRNNIEEAVLLLMILLRKFSLKKIERDPSILDHLSFALSVSGELRALASQVEELVPGILDRKERYYTLALCYYGEGEDLVALNLLRKLFSSSESPNCIQPLILASKICGENPTYAEEGVAFARMALSSLQGECNQMGSLANCLLGVSMSAQARSVLSDSERITRKYDALEALETAEKEMKERDPKVIFHLSLENAEQRKLDVALYYAKESLKLEAGSNVKGWILLARILSAQKRFMDAENIISAALHQTGKWDQGELLRTKAKLQIAQGQLTNAIETYTHLLAVLQVQSKSSGVGKKLLKDSGNNDGSLELETWHDLANVYTSLSQWRDAEVCLSKSKAITPHSASRWHATGLLYKAKGFHNEALKAFANALDAEPTHVPSLVSAATVLRQLGDQSLTVVRSFLTDALRLDRTNPSAWYNLGLLYKTEGGASTIEAAECFEVANLLEESAPVEPFR* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00653 731 Gene3D Tetratricopeptide repeat domain 566 726 IPR011990 GO:0005515
Eupl07g00653 731 ProSiteProfiles TPR repeat profile. 620 653 IPR019734 GO:0005515
Eupl07g00653 731 Gene3D Tetratricopeptide repeat domain 53 565 IPR011990 GO:0005515
Eupl07g00653 731 SUPERFAMILY TPR-like 530 704 IPR011990 GO:0005515
Eupl07g00653 731 SMART tpr_5 530 563 IPR019734 GO:0005515
Eupl07g00653 731 SMART tpr_5 152 185 IPR019734 GO:0005515
Eupl07g00653 731 SMART tpr_5 494 527 IPR019734 GO:0005515
Eupl07g00653 731 SMART tpr_5 586 619 IPR019734 GO:0005515
Eupl07g00653 731 SMART tpr_5 620 653 IPR019734 GO:0005515
Eupl07g00653 731 MobiDBLite consensus disorder prediction 48 62 - -
Eupl07g00653 731 MobiDBLite consensus disorder prediction 48 67 - -
Eupl07g00653 731 PANTHER PROTEIN NPG1 22 731 IPR043376 -
Eupl07g00653 731 SUPERFAMILY TPR-like 86 555 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00653 Eupl-Chr7 20461291 20478361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00653 13 731 Calmodulin-binding Proteins AT4G28600 58.038 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00653 K21843 - nnu:104600935 1108.2