Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00594 ATGAACCGAAGGAAGCTTCTGCTTCATGAAAAGGTTGAGGTGAGGCAGTTTGAGGAAGGCCTTAGAGGTTCATGGCATCCAGGAGTAGTTGTTGCCATCTCTGATTTATGCCGTTCCATTGAGTACGATGAACTTCTTAGCGACACAGGCGAGTCGAAGCTCATTGAGTCCATATCTGTTTCCAAGGCGGTGGAAGGCCTCTGCCGTCGTCGTCGTCGTGTCCTGCCAATCCACCGTGGATGTATCCGACCTTGTTACCCGACTCCTCCAACCAATTATTGTAAACCCAAGTCCATTCGTGGCCTCTGTGTTGATGCGTTCTATGAGGATGCATGGTGGGAAGGTGTGTTGTTTGATTGCGATGAATGCTCAGATCAGTGCTCTGTATTTTTTCCTGATGAGGGTGATGAGCGAGAGTTCAATGTGAGTGATTTGCGCGTTAGCCGCGAGTGGGATGAGTACTTAGGTGATTGGAGAGATCGTGGGACATGGATTTTGATGGAGCTGGCTGAGGAACTTGTGCCGGGTGGGCCTTTATCTTTTTTTGTCAAGAATCTTTGGTTCCATTTGCGGGTTAATGTTGGGTTTGTGAAAATGGTTTCGGAGTGGACATGTGGTATTCAGAATTTGTGGAGTAGATACCTAACAGAGGTCATTCTTGAAATCACATTTGAATCTAGTAAACAAGCCCTTGGTCCTCCCAATCTTCCATCTAGCGTTTCAAGAAAGAAACAGAGGAAATCGAAGAACTCTCTGCGGGCCAGCATGGATTTGCAGCAGCATGGCCAGATCATTCAGAAAGGTAGATGCAATGGCTTCTATATTGGTAATTTGAGTCAGGACGAAAAGAAACCATGCTCTATTCTTCCTAAGCATAAAAAGCATTCAAAATCCGTGGTAGTTGACAAAGCCGAAGGTAATGGGTGTTTGGTTGATAATTTAACGGGGGGTAAGGAAGTGCCATTTGTTGTTGCTCAAGAAGAAAACTATCGGTCCGTCACCAACAGAAGGAAGTCGAAGAAATCATTGAAAACTGATGTTAATATGCATTCACAGGCCATGCTTACTAGGCAACGAAACTGTGACAGCTTCCCCATTGATTGCTTGGGTCAGAGTAATGGAAAGTTATCTCATGTCCTTCTACCCAAACAAAAGAAACGATCATTCAAGGGGAAAATGAAATTAGAGAAATCAGAATCCTTCATAATTCACAAAGCCAATGATACCGGGTTTCTGGTTGATAAGACAATTGGGGAAAATGAAACGGCATTTGATTTTTCACACGTGCAAAGCAACGCAATTTGGGAAGACAAGTTCAATGGCTCTATTGATTGCTTAGCACAGAGTGAAGAAAAGGAACGTTGTGTTGTACCTGCGCATACCATCTGTAGTCCAAGGAAGAGGAATGGAAAGGGGTCACGTGTTTGTATCAAACAAAGTACGGAAAAAAGGCCTTTAAAGAAATTTCAGCAGGCCAATGTTGATACGAAGTTAATGTCCAAGAGAGAGGAAAAGGCATTTGACGTTCAGCTAAAACAAGGTGAGCAATTTGTTACCCCCTGCCGTCGGTCCCTACGCTATGCCAATTTCGACAAAAATGTTAGCCTCAAAGATATGGTGTCCCGTCCTCGCAAGCGGAGGAGGAGAAAGTACCATGGTTGCCAACAAAGTGACACCATATGCATTGTTTGTCAGTTTGGAGGACAGCTTGTTCTATGTGATTACTGCCCATCCTCGTATCATTTGAGTTGCATTGACCTTAAGGATGTTCCTGAAGGGAAATGGTTTTGTCCATCTTGTCGGTGTGGCATATGCGGCTTGAGAGATTCCAATAGCGATTTCCGAGCATTCACTGCCATTTGTTATCAGTGCTCACGTCAATATCATGTGGAGTGTTTGAGTAAACAAGGACTGCTGATGCCAGAAAGTCGTCTGCGAGAAAAGTTTTGCAGTGAAAAGTGTATTGAGATATATTTGTATCTTCATCAACTACTTGGGAAATCAAATCCAATGAATGTGGAAGGTCTATCCTGGACTATCATGAGATCAGGGAGAAATTATTGTTATATTAATGATATGCCAAAAATTAAGAGCTATAAGGAGTTATCTCGTTCCCTTAAAGTCATGCATGAGTGTTTTGAACCTGTCCTTGAGCCTCATACAAAAAGAGATCTTGTTGCAGATGTTCTTTTCAATAGAGTGTCAAAATTGAAACGTTTAGATTTCCATGGGTTCTATACCATGGTGTTACAAAAGGGAGATGAATGCATATCTGTGGTTACAGTGAGGATTCTCGGACCAAGGGTTGCAGAGATGCCTCTAGTTGCTACCTCTTTTCAATATCGTCGGAAGGGTATGTGTCGCCTTCTTGTGAATCAGCTAGAGAAGATGCTTTCAATACTGGGTATAGAAAGACTAGTCTTGTCGGCCGTTCCTCAGCTAAGGGAAACATGGAAGACTTCCTTTGGGTTTACAGAGGTGCCACTTCCAGAAAGATTAAAACTCTTGGGGTATCCCTTTTTGGGCTTTCAAGGCACTACAATGTGGCAGAAATTCCTGACAAAATCAAGAGAGAAATCGAGGGGAATGTTCGATAAACCAGAAGGGATAGATTCTAAAATTTCTTTGGACAATCAGATGGCTAATTCCAAATGCAAGTTTTGGGGCTTGTATTACAAGCGCATACCAAAAAAGAATATTGGAAAGGAGAACTCGGTTCAGAGTTGTACTGGAAGTATGTCTATGTACAAATATGTCTACAAGCGGAGACGAATACTGACCACCAAAGATTCAAGATCCTGA 2802 0.4286 MNRRKLLLHEKVEVRQFEEGLRGSWHPGVVVAISDLCRSIEYDELLSDTGESKLIESISVSKAVEGLCRRRRRVLPIHRGCIRPCYPTPPTNYCKPKSIRGLCVDAFYEDAWWEGVLFDCDECSDQCSVFFPDEGDEREFNVSDLRVSREWDEYLGDWRDRGTWILMELAEELVPGGPLSFFVKNLWFHLRVNVGFVKMVSEWTCGIQNLWSRYLTEVILEITFESSKQALGPPNLPSSVSRKKQRKSKNSLRASMDLQQHGQIIQKGRCNGFYIGNLSQDEKKPCSILPKHKKHSKSVVVDKAEGNGCLVDNLTGGKEVPFVVAQEENYRSVTNRRKSKKSLKTDVNMHSQAMLTRQRNCDSFPIDCLGQSNGKLSHVLLPKQKKRSFKGKMKLEKSESFIIHKANDTGFLVDKTIGENETAFDFSHVQSNAIWEDKFNGSIDCLAQSEEKERCVVPAHTICSPRKRNGKGSRVCIKQSTEKRPLKKFQQANVDTKLMSKREEKAFDVQLKQGEQFVTPCRRSLRYANFDKNVSLKDMVSRPRKRRRRKYHGCQQSDTICIVCQFGGQLVLCDYCPSSYHLSCIDLKDVPEGKWFCPSCRCGICGLRDSNSDFRAFTAICYQCSRQYHVECLSKQGLLMPESRLREKFCSEKCIEIYLYLHQLLGKSNPMNVEGLSWTIMRSGRNYCYINDMPKIKSYKELSRSLKVMHECFEPVLEPHTKRDLVADVLFNRVSKLKRLDFHGFYTMVLQKGDECISVVTVRILGPRVAEMPLVATSFQYRRKGMCRLLVNQLEKMLSILGIERLVLSAVPQLRETWKTSFGFTEVPLPERLKLLGYPFLGFQGTTMWQKFLTKSREKSRGMFDKPEGIDSKISLDNQMANSKCKFWGLYYKRIPKKNIGKENSVQSCTGSMSMYKYVYKRRRILTTKDSRS* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00594 933 PANTHER PHD FINGER PROTEIN 12 442 872 IPR042163 GO:0003714|GO:0045892
Eupl07g00594 933 ProSitePatterns Zinc finger PHD-type signature. 561 600 IPR019786 -
Eupl07g00594 933 SUPERFAMILY FYVE/PHD zinc finger 533 601 IPR011011 -
Eupl07g00594 933 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 694 854 IPR000182 GO:0016747
Eupl07g00594 933 Pfam PHD-finger 560 602 IPR019787 -
Eupl07g00594 933 Pfam Agenet domain 10 87 IPR008395 -
Eupl07g00594 933 CDD NAT_SF 749 809 - -
Eupl07g00594 933 SMART agenet_At_2 96 153 IPR014002 -
Eupl07g00594 933 SMART agenet_At_2 4 63 IPR014002 -
Eupl07g00594 933 SMART PHD_3 602 651 IPR001965 -
Eupl07g00594 933 SMART PHD_3 560 601 IPR001965 -
Eupl07g00594 933 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 544 653 IPR013083 -
Eupl07g00594 933 ProSiteProfiles Zinc finger PHD-type profile. 558 603 IPR019787 -
Eupl07g00594 933 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 708 829 IPR016181 -
Eupl07g00594 933 Gene3D - 693 835 - -
Eupl07g00594 933 MobiDBLite consensus disorder prediction 229 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00594 Eupl-Chr7 18499427 18519133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00594 556 801 PHD Transcription Factor Family AT5G58610 47.656 1.32e-68 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Eupl07g00594 Agenet 7.4e-12 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00594 - - tcc:18611905 745.347