Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00587 ATGGAGTCTTTGGAGGCAGCGGCGTGTTCAGTGGACGACCTTCTCGACTTCTCATCGGACACCGGAGAAGAAGACGACGAAGATGAGAACAACAAAAAAGCCCCTTTGGACTCCATACCCAGAAATAAAATCCACCACCAAGAAGACAAAGCTGTGTTGAACATTTACAACTCCGATAAAGACCACCGTTCCCTTCCCGTGTTGCTAGAAGAAGAACTGGAATGGTTATCGAATAAAGACGCATTTCCGACCATAGAAACTCTCGACATTATTTTAGAGAAACCAAGCAATGGATTGGTGCTCGAGAACAGCAGCAGCGGCAGCGGCAGTGTTATGAACTGCTGTAGCCCCCGTGTTCCGGTGCGAGCAAGGAGCAAGAGACGGAGGCGGAGGCGCAGTTCTTTTTCCTTCTTGTCAGGTCACCCGTGGTGCGAACCCAAGAAGAAGAGTAGAGGAGGAGGAGGAGCAGGAGCGACGATAAGGATGACGGGCAGGGCGTGTGTGCATTGCCAAACGGAGAAGACCCCGCAATGGCGAGCTGGACCTCTCGGACCAAAGACACTTTGTAACGCATGTGGGGTGAGGTACAAGTCAGGCCGGCTAATGCCGGAGTATCGGCCGGCAAGCAGCCCATCTTTCTCAAGTAAGTTGCATTCCAATTCTCACAGGAAAATATTAGAGATTAGAAGGGAAAAACAAGAGATGTTGCAGTCTTTTCAGAAATGA 726 0.5028 MESLEAAACSVDDLLDFSSDTGEEDDEDENNKKAPLDSIPRNKIHHQEDKAVLNIYNSDKDHRSLPVLLEEELEWLSNKDAFPTIETLDIILEKPSNGLVLENSSSGSGSVMNCCSPRVPVRARSKRRRRRRSSFSFLSGHPWCEPKKKSRGGGGAGATIRMTGRACVHCQTEKTPQWRAGPLGPKTLCNACGVRYKSGRLMPEYRPASSPSFSSKLHSNSHRKILEIRREKQEMLQSFQK* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00587 241 ProSitePatterns GATA-type zinc finger domain. 167 192 IPR000679 GO:0006355|GO:0043565
Eupl07g00587 241 CDD ZnF_GATA 166 214 IPR000679 GO:0006355|GO:0043565
Eupl07g00587 241 PANTHER GATA TRANSCRIPTION FACTOR 11 234 - -
Eupl07g00587 241 MobiDBLite consensus disorder prediction 28 44 - -
Eupl07g00587 241 MobiDBLite consensus disorder prediction 111 134 - -
Eupl07g00587 241 MobiDBLite consensus disorder prediction 1 44 - -
Eupl07g00587 241 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 164 224 - -
Eupl07g00587 241 SMART GATA_3 161 211 IPR000679 GO:0006355|GO:0043565
Eupl07g00587 241 ProSiteProfiles GATA-type zinc finger domain profile. 161 197 IPR000679 GO:0006355|GO:0043565
Eupl07g00587 241 FunFam GATA transcription factor 159 241 - -
Eupl07g00587 241 Gene3D - 161 234 IPR013088 GO:0006355|GO:0008270
Eupl07g00587 241 Pfam GATA zinc finger 167 202 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00587 Eupl-Chr7 18045672 18047171 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00587 11 233 C2C2-Gata Transcription Factor Family AT3G24050 41.729 2.57e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Eupl07g00587 GATA 7.1e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00587 - - nnu:104602131 231.106