Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00572 ATGGGAGATGAAGAGAAAGGATCCCAACTTGCAGGAGACTGCAATGTGGAAGGTACAGAAACGAGGGTCTTTCCTTGTTTGTTCTGTTCAAGGAAGTTTTACAGTTCTCAAGCCTTGGGAGGTCATCAAAATGCTCACAAGAAGGAGAGAACAGCCGCGAGAAAGGCGCAAAGGGCTTCGGACTACAGGCAATACAGCTTGGCTTCATCTCCACCACAGCCAAATCCAATAGTTTTTGCTAACAATCACGTGGGACTTGTCAATCCTTCCTTGTACATAACTGCACATGCAGCCAGCCTTGGTCATTTTCCTTCCCATCATTTCTCTGATCATCAGTTTGGATCCAACGGTGCACCAAGGTTCGATTACGGGGTTTATGGTGGCGGTTCTTCATCTTCTTTGTATAGATATGAAGAGGATAGGCAGATGTTCTTGAATTGGCAGAGGAGCTTCAGAAGCAGCGGTTGCGATGGAGAATCGTCGAATTCGCTGATGATGAATATGAATCAGAATCTCGAGAATCATGATAGGGATAAAGAACAGAAGCTTGATCTCTCTTTACATTTATAG 570 0.4474 MGDEEKGSQLAGDCNVEGTETRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAQRASDYRQYSLASSPPQPNPIVFANNHVGLVNPSLYITAHAASLGHFPSHHFSDHQFGSNGAPRFDYGVYGGGSSSSLYRYEEDRQMFLNWQRSFRSSGCDGESSNSLMMNMNQNLENHDRDKEQKLDLSLHL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00572 189 MobiDBLite consensus disorder prediction 40 74 - -
Eupl07g00572 189 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 13 189 IPR044246 GO:0009788
Eupl07g00572 189 SUPERFAMILY beta-beta-alpha zinc fingers 20 51 IPR036236 -
Eupl07g00572 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
Eupl07g00572 189 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Eupl07g00572 189 Gene3D Classic Zinc Finger 9 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00572 Eupl-Chr7 17438670 17439729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00572 2 189 C2H2 Transcription Factor Family AT5G48890 36.735 1.27e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00572 - - ming:122058621 202.986