Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl07g00558 | ATGATAAGCACTAAAGAGTTTCTAACATACAAGCGAAAGCAAAAGACATCGAGATTTAGGGGACCTAATTCATCTTCCATATCTCCAAGTGATACTCTTTCAACAAGACAAGGCCAGCATGCTGAATCAAGTAAAAAGTCCTTATTGGAGAATCAGAAAGGAGATGCTAGGCCCTGCATTAAATGTGCTACCTGTGATGTTGATGGCATCTTGCTGCACTGTGATAGCTGCCCCCGAACTTATCATCTTCAATGCATTGATCCCCCCATCAAGCATATTCCTCGTGGGCGATGGTTATGCTCTGATTGTATTAAACAACGTGATTCTGGAAAGTCTTTGCAGCCGCAAGTTCGAAAACCGGGGAAACTAAGGGCAAGGAAACTTATCGAGGGATCTGAGATGGGACCAATGACACTGCGCTCTCGTAAAGTGCTTCGGACGATAAACCCTGGTGAGGTTCCCTCAAGGAAGGAGACAGATGGCTTCCTTCAATTAGATGCATTGCCTGAAAAGATGTCAAGTTACATTAAGATAGACTTACGTTCATACATGAATTTTGGCACTGCACCCAAGGGTGCAGACACTGAAGGGAGGTCAATCTCTCCATCAGTAGAAATGGACACTGAGAAGAAAATGAGTTCTGTATTCTCAGATTCATCTATCGAAATAAAGTGCAGCTCTGAATGTCCAAGTGCCTTTATTTTTAAGACATCTCATTCAGAAACCACTGAATCACTCTCCCAAGATAAGTCCAATTTAGTGAGCAGTGACGGGCCTTTGACAGAGAAGCTTAGCACCCCACTGATTACTTTCAGTCGAAGAACTAAAAAGAAGGATGTGAATGGGATACAAAACAAGCTGATAATTGTGGAGAAAAAATCTTCAGTGGTCAATCAAAGCAACTCTGCATCTGGTATAGGCAGTTCATGTGAAGACGCCTCTCAAAAATACAGTTCTGTGGATCAGTCAACAGCTTTAAAAATGTTAAGGGAAGATCCGGACGTGATCCATTTGGCTGTTCAAAGACAAGATAAGATAAGCGACAGAGATGAAGATGTCAGTGATACATCCACTTTAGTAGGAGGTGCTCTAGAAACTAAGATTGGCAAGCATGTGGAAAAGCAGTTTTCTTGGGGATGCATGTCAGAAGATGGATCACCTATTGCTGAGTGTGTACAGGGCCTGAACCGCCAGCATCCTTCTTCTACGCACTCCAAACATGCTGCGGATGTCCAGGACGACCAACTTATAAAATCTATAGAAGCATCTTCAACAGATGTGATGACAGACACCTTTTTTAAGGTGGTAAATGAAGAGAAACAGTTACCCAAAGATGGAGCTTCTACTGGAATGAAATCTCAAATTATGTTGAGTGACCATGTGAAAACAACAATCAAGCTTGATGATGTTTTTGGAGATGGAGCATCCCTGGCCCACCTGGACCTATCTGTTACACCTGATTCACGTGGTATGCTGGAGTACACTACAGATGTGGAACCGAGCTGCCACAAAACATGTATTGATGCCGCACCTGAAACTTTTCTGGACTCAAATTCAGTGAGCCCAAAAGATGCCACTGTTTTGCATGAGGTAGTGACTCTAAGAGGCAAACCTTCAGAATTGTTAGGAAATGCGGATGAGACACTGCGTGAGACACTATCTTCCCATTATACACTGACAGGTAGAAACCCATGCAGTTATATGGATGGTAAGGATTCTCCTGTTCTCTCGATGGGCATATCTCTACAGGATCCATGTCAGCAGAGCCTTTCAGATAATGTAATCAATCAGATGGTCCCATTAGCATGTATAGCACCAGAGGCACCTGCTTGCGTGGATTTCCATGGAAGAATCTTCCCTGAGTCAGGATGTGAAAGGAATCAGTGCAAACAAATGCCATCCAAATCCAAATCTTCTCTTTTCTCACCTCATTTTCTAGGTCTATCACTGCTAACGAATCCTGAAGCCGCAGTTAATACCTTAAAGGAAACCCCCTGTGTATCATCATTGCCAAGCTTTAGCTTTAAAAATAGAGGCGTCATTCTAGATATGCTGCCCCAATCTGCCTCAGACCAGAATTTGTCATTTCTAAGACAAAAGCAGATGCTTCAGAGCATTGTAACAAGAGCAGATGCATTAAAAGGAAGTCAAGGATGTTCATTGGCTAAGTTCAAGGAATGCCCAACTGCATGGTCAGAAGAAGAGTTGGATTTTCTTTGGATAGGTGTGAGGAGACATGGAAGGGGAAATTGGGATGCTATGTTAAGGGACTCGAGGTTGTGCTTCTCGAAGTGGAGAGTAGCAGAGGACTTAGCTGAGCGGTGGGATGAAGAACAATCAAAAATTTTGAATGGCACGCTGATTCAACCGTTGAGGTTGTCAAAACCACCAGATATCTCTCCAGGCATAAGCAGTGGTTTGTTGCCAAGAGCAGGAGTGGTTGGTATTCAATGTAGCAGTTATCCCTCTGAATGTCACACACCAATGAGATCTCAAGCCTTGACTGATGAAACTCGACTTTCTCTGGGAGATGCATATGTTCACAGGGAGGTGAATATCCCAAAGAGGCGTCCATTAAATTTGCCAGGCCAGTATACTACGCATCCAACACTAGCAAAAAACAGCAGTCCAGACAAGGCTTCTTGTGTTATTAATAGTCGACTAACAAATTCAGTTCTTCAGAGAATTGGTACCAAACAGCTCCACAAATCTTCTAGAGGTCAAAGCAGTTGCTCATATTCAGATTGCGAACGGGCAAGATATGGTAGAGGACAGGCAAGATATGGTAGAGAGTACTCTATTCTTCAGCAGGAACCTGTTGAAAGATCAGCAAGTCATGGTGGGGGATGGAGTGGAGAGTTGTTCAACAGTGGGGAGAGCAAGGGAACTCTGAACGATTCTTTTTTGAGAAATGACCCATCTACTAGTCTGCCAGCTAAGGATAATCTGCCTCATTGGCTGAGAAAAGTGGTTAGTGTGACTCCTCCAAGGCCACCAGAGCCAGCACTACCTTCTGCTGTTTCAGTTGTTACACAGTCAGTGAGCTTGCTTCCTAACGACAAGCATCAGGTTATCTCACCTTTTACCGATCCTGGAGCCCTGCCGGTTCCAACTACAGATCTTCGTCAAAGGTCGAGGAAAAACAGAACCAATAGTAAGTTAGGTCATCTAAGAGCATCTGACATACCATCATCTATTGCCCATTCCACCAGCATTTCCTTGATGGAGACTAGGTGCAGTCTTCTTTCAACAATGGGCTCAAACTCTCTAATCTCTGCATCAGATAATAGAATCTTGAATCAGAACAGGTCAGCAGATTTGAGCCTCACATGTTCTTATCCTGTTACTAGACTAAATGACTTGATCATCATTGACAGTGATGCATCTTCCGAGGAGACAATATCAGATGATCAAAACGGTAGGCCTTAA | 3429 | 0.4348 | MISTKEFLTYKRKQKTSRFRGPNSSSISPSDTLSTRQGQHAESSKKSLLENQKGDARPCIKCATCDVDGILLHCDSCPRTYHLQCIDPPIKHIPRGRWLCSDCIKQRDSGKSLQPQVRKPGKLRARKLIEGSEMGPMTLRSRKVLRTINPGEVPSRKETDGFLQLDALPEKMSSYIKIDLRSYMNFGTAPKGADTEGRSISPSVEMDTEKKMSSVFSDSSIEIKCSSECPSAFIFKTSHSETTESLSQDKSNLVSSDGPLTEKLSTPLITFSRRTKKKDVNGIQNKLIIVEKKSSVVNQSNSASGIGSSCEDASQKYSSVDQSTALKMLREDPDVIHLAVQRQDKISDRDEDVSDTSTLVGGALETKIGKHVEKQFSWGCMSEDGSPIAECVQGLNRQHPSSTHSKHAADVQDDQLIKSIEASSTDVMTDTFFKVVNEEKQLPKDGASTGMKSQIMLSDHVKTTIKLDDVFGDGASLAHLDLSVTPDSRGMLEYTTDVEPSCHKTCIDAAPETFLDSNSVSPKDATVLHEVVTLRGKPSELLGNADETLRETLSSHYTLTGRNPCSYMDGKDSPVLSMGISLQDPCQQSLSDNVINQMVPLACIAPEAPACVDFHGRIFPESGCERNQCKQMPSKSKSSLFSPHFLGLSLLTNPEAAVNTLKETPCVSSLPSFSFKNRGVILDMLPQSASDQNLSFLRQKQMLQSIVTRADALKGSQGCSLAKFKECPTAWSEEELDFLWIGVRRHGRGNWDAMLRDSRLCFSKWRVAEDLAERWDEEQSKILNGTLIQPLRLSKPPDISPGISSGLLPRAGVVGIQCSSYPSECHTPMRSQALTDETRLSLGDAYVHREVNIPKRRPLNLPGQYTTHPTLAKNSSPDKASCVINSRLTNSVLQRIGTKQLHKSSRGQSSCSYSDCERARYGRGQARYGREYSILQQEPVERSASHGGGWSGELFNSGESKGTLNDSFLRNDPSTSLPAKDNLPHWLRKVVSVTPPRPPEPALPSAVSVVTQSVSLLPNDKHQVISPFTDPGALPVPTTDLRQRSRKNRTNSKLGHLRASDIPSSIAHSTSISLMETRCSLLSTMGSNSLISASDNRILNQNRSADLSLTCSYPVTRLNDLIIIDSDASSEETISDDQNGRP* | 1143 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl07g00558 | 1142 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 8 | 117 | IPR013083 | - | |
| Eupl07g00558 | 1142 | ProSiteProfiles | Zinc finger PHD-type profile. | 59 | 106 | IPR019787 | - | |
| Eupl07g00558 | 1142 | PANTHER | PHD FINGER PROTEIN | 19 | 321 | - | - | |
| Eupl07g00558 | 1142 | SUPERFAMILY | Homeodomain-like | 729 | 776 | IPR009057 | - | |
| Eupl07g00558 | 1142 | MobiDBLite | consensus disorder prediction | 19 | 45 | - | - | |
| Eupl07g00558 | 1142 | SUPERFAMILY | FYVE/PHD zinc finger | 56 | 109 | IPR011011 | - | |
| Eupl07g00558 | 1142 | CDD | SANT_TRF | 731 | 775 | - | - | |
| Eupl07g00558 | 1142 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Eupl07g00558 | 1142 | ProSitePatterns | Zinc finger PHD-type signature. | 59 | 103 | IPR019786 | - | |
| Eupl07g00558 | 1142 | Gene3D | - | 692 | 795 | - | - |
Showing 1 to 10 of 12 entries
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl07g00558 | - | - | nnu:104587900 | 696.812 |
Showing 1 to 1 of 1 entries