Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00538 ATGGAAAGAAAATCGGCATTTGTTCCTAACAATGGTTGCTTGAACTTCATTGAAGAAAACGATGAAGTTTTAATTTCTGTGGTCTGTCGTAAGGGTCATATCGCGGGAAATATTCTCGGAGTTAGTTTCAAGGTGGGGAAGGTTTCTGGCGCGTCACTGTTGGCTCTTTTCATGGAGAAGGAAGGGAAGCCTCGGTCTTAA 201 0.4328 MERKSAFVPNNGCLNFIEENDEVLISVVCRKGHIAGNILGVSFKVGKVSGASLLALFMEKEGKPRS* 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00538 66 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 6 66 IPR006032 GO:0003735|GO:0005840|GO:0006412
Eupl07g00538 66 Gene3D - 2 66 IPR012340 -
Eupl07g00538 66 FunFam 40S ribosomal protein S23 2 66 - -
Eupl07g00538 66 Pfam Ribosomal protein S12/S23 5 65 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00538 Eupl-Chr7 14283718 14283918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00538 5 66 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 72.581 4.07e-26 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00538 K02973 - cpap:110814592 90.5077