Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00528 ATGGACGTGGACATGGATGATATTCCCCTTCCAGAAGAACTCGAATGGCTCGAAAGCAACGCTCTCCTCCCCGAAGAAGACGAAGAAATACTAGACTATTATCCGGAAGAAGAAGAAGAAGAACAACAGCAGCAGCTTCCAGAACCTTCTCGAACAACTCCTCCAGGTACATCTAACGTTAATCTCCCTCCCAAATCAACATCTCTTGCCGATTCATCCGTGGTTTCCAAGAATCGGATCAACGGCAAGAAGAGGCCGTGGTCAGATAAGGACGGCTCTGATGCATTGCCTTCCGGAGAGGCACCGTCTGATGAGAAACGGAACAGACCGGCCCCACCTGGAATCAAGATCGACGAGGATTGGCTTCGATATTCGCCGCCAAGGGAGAATACTGTCGTGGAACCAGTGGTGGTTGTCGAGGAGGAGAAGTTTCTTTCTCGGTTTGCCTCGGCGATTGAGGGAGATTGCGTTCCTGTGACCGGACCTTGCGGCAATCGGGTCTATGCTAAGATGTGCCGGGTGGAGACAAATATTGTAACAAAGAAGTTAAGCATACACGGACACGCCAATGGTCTTATCTCAGAACCAATCAATTTTCTAATGGAAAGAATGGAACAAGAGGCTCTCTCAAAGGCTTTGCAAGCTAGCTCTGAATCTCCCAATGAATTGATCCATCCTGAAGCTCCACTGGTCAGTGAACAGCTCTGGGTGGATAAATATGCTCCAAATTCATTTACTGAGCTTCTCAGCGACGAGCAGACAAATCGAGAGGTTCTCTTGTGGTTGAAACAATGGGATTCCTGTGTATTTGGATCTGAAATAAGGAGTACCACGGATGATGTTTTGTCTTCTCTGAGACGACATTCTTCACTCTCTCAACATCAAAAACTCTCCGATACTAGTTCTTTCAGCAAGAATAGAGGACCCCCTTGGAGTAATAGAACTTTCAAACATGCAGACAATTCAGATCGAGAAAATAACAACTTAAAAGGCATTCGTGAATTATGGAACAAAAAGTCGAGGGATACTGGTCCTCCAGATCAGAAGGTTCTTTTACTTTGTGGTCCCCCGGGGCTTGGAAAGACAACACTTGCACATGTTGCTGCTAAGCACTGTGGCTACCGTGTTGTAGAGATAAATGCTAGTGATGATCGGTCATCATCAACGATCGAAGCCAAAATTCTTGATGTCGTGCAGATGAACTCTGTCATGCCTGACGCGAAGCCCAAGTGCTTGGTTATTGATGAAATAGATGGAGCTCTTGGTGAAGGGAAGGGTGCTGTGGAGGTGATTCTAAAGATGGTTGCTACTCAAAAGAAGTCTGAAGCTGGAAAGGGAAATGTTGCTCAGGAGGAACAACTAGGAAAGGTTTCATCTAAAAAGGGACGTAAAACTGCATCACTGTCAAGACCTGTGATCTGCATCTGCAATGACCTTTTTGCACCTGCTTTGAGGCCACTGCGCCAGGTAGCAAAGGTGCATATATTTGTGCAGCCAACAGTTAGTCGTGTGGTGGGCAGGCTTAAATATATTTGTAACAAGGAAGGATTCAAGACAAATTCTATTGCACTTACAGCACTTGCTGAGTATACTGAATGTGACATACGTTCGTGCCTGAACACACTTCAATTTCTCAACAGGAAGAAAGAAACTCTCAATGTGTTGGAGATCAGTTCTCAAGTTGTTGGTCGGAAGGACATGTCAAGAAGTGCTTTTGACATCTGGAAAGAGGTTTTTCAAAAGAGAAAAGTGAAACGGGAACATAAATCCATGAATAACTGCAGCAGTATGTCCAGTGATTTTGACTTTCTACACTCCCTCATATCTAACCGTGGCGAATATGAATTGACTATGGATGGGATTCACGAAAACGTTTTGCAGCTCCATTATCACGATCCAATGATGCATAAGACAGTCAAGTGCTTAAACATTCTTGGCGTTTCTGATTATTTGCATCGGTATATCATGCGAACTCAACAAATGTCACTTCTTGTTTATCAACCTTCTACTGCAATAGCCATCTGCCGTCTAATATCCCAGATCGAAAGACCAAATATTGAGTGGCCAAAATCTTTCCAAAGATACCGAGCAATGTTCATGGAAAAGAAGGACCTTTTAAGGTGTTGGCACAACAAAATCTCACCATCTATTTCAAGGCATTTGTCAACTGAGTCTTTCGTAGAAGACGCCGTTTCTCCATTATTACATATTCTATCACCACCAACTCTAAGGCCGGTAGCACTGCACTTACAGTCAGAGAGAGAGAAGGACGATCTGGCTCAGTTAGTAGATACAATGATCTCATATTCTATAACATATAAGAACATGAAACCTGAACTTCTACCCAGTACCCCGAGGCACGAAGCATCTTTAGACGCATTAGAACTTGCTTTTGATCCCCCCATTGGCGATTTTATTAACTTCAAGGGCTTTATATCTGGACATTCTGTACTCTCTTTAGCTATGAAGAAGGTGTTGGTGCATGAGGTTGAGAAGCAAAGGATTCTGCGAGAAAGCATTGGCAGATCTGTACATTCAAATGATGGGAGCAACACAGGAAATCAGGTTCTGTCCAGGGAAGCAAGCAGCAAAGTACTCTCAGCCAAAACAGATTCTACAGTTGCATATGCTGAGAACAACATGGAAATTGCAAATGATAAATTGTCTCCGAGGCAATGGAAAGCCAATACCTCTACAAACTCATCAACTTTAGGTTCCAATAAAAGTGCTACAGCCAGCGTGAAATCAAGAGCCCCTGGAGATCCAAAGAAGCATTCTAGTGGCTCCTTTAGTTTCTTTGACAGGTTCAGAAAGAGCGGCAAGGGCCTTGAAAATCCTTCTAATCCTTCGCATAAGTCGGCAACTTTGGAGAGAGATTCACGCCCTCTGCTATTTAAGTTTAATGAGGGTTTTACAAATGCTGTGAAAAGGCCAGTTCGAGTTCGTGAATTGCTGTTGTGA 2961 0.4387 MDVDMDDIPLPEELEWLESNALLPEEDEEILDYYPEEEEEEQQQQLPEPSRTTPPGTSNVNLPPKSTSLADSSVVSKNRINGKKRPWSDKDGSDALPSGEAPSDEKRNRPAPPGIKIDEDWLRYSPPRENTVVEPVVVVEEEKFLSRFASAIEGDCVPVTGPCGNRVYAKMCRVETNIVTKKLSIHGHANGLISEPINFLMERMEQEALSKALQASSESPNELIHPEAPLVSEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTTDDVLSSLRRHSSLSQHQKLSDTSSFSKNRGPPWSNRTFKHADNSDRENNNLKGIRELWNKKSRDTGPPDQKVLLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMPDAKPKCLVIDEIDGALGEGKGAVEVILKMVATQKKSEAGKGNVAQEEQLGKVSSKKGRKTASLSRPVICICNDLFAPALRPLRQVAKVHIFVQPTVSRVVGRLKYICNKEGFKTNSIALTALAEYTECDIRSCLNTLQFLNRKKETLNVLEISSQVVGRKDMSRSAFDIWKEVFQKRKVKREHKSMNNCSSMSSDFDFLHSLISNRGEYELTMDGIHENVLQLHYHDPMMHKTVKCLNILGVSDYLHRYIMRTQQMSLLVYQPSTAIAICRLISQIERPNIEWPKSFQRYRAMFMEKKDLLRCWHNKISPSISRHLSTESFVEDAVSPLLHILSPPTLRPVALHLQSEREKDDLAQLVDTMISYSITYKNMKPELLPSTPRHEASLDALELAFDPPIGDFINFKGFISGHSVLSLAMKKVLVHEVEKQRILRESIGRSVHSNDGSNTGNQVLSREASSKVLSAKTDSTVAYAENNMEIANDKLSPRQWKANTSTNSSTLGSNKSATASVKSRAPGDPKKHSSGSFSFFDRFRKSGKGLENPSNPSHKSATLERDSRPLLFKFNEGFTNAVKRPVRVRELLL* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00528 986 MobiDBLite consensus disorder prediction 293 311 - -
Eupl07g00528 986 MobiDBLite consensus disorder prediction 887 931 - -
Eupl07g00528 986 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 7 986 - -
Eupl07g00528 986 CDD HLD_clamp_RFC 499 554 - -
Eupl07g00528 986 SMART AAA_5 347 502 IPR003593 GO:0016887
Eupl07g00528 986 Gene3D - 499 568 - -
Eupl07g00528 986 MobiDBLite consensus disorder prediction 841 864 - -
Eupl07g00528 986 FunFam Chromosome transmission fidelity protein 18 499 566 - -
Eupl07g00528 986 CDD AAA 351 435 - -
Eupl07g00528 986 MobiDBLite consensus disorder prediction 890 914 - -
Eupl07g00528 986 Pfam ATPase family associated with various cellular activities (AAA) 351 467 IPR003959 GO:0005524|GO:0016887
Eupl07g00528 986 MobiDBLite consensus disorder prediction 843 864 - -
Eupl07g00528 986 MobiDBLite consensus disorder prediction 293 327 - -
Eupl07g00528 986 MobiDBLite consensus disorder prediction 1 43 - -
Eupl07g00528 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 553 IPR027417 -
Eupl07g00528 986 MobiDBLite consensus disorder prediction 46 79 - -
Eupl07g00528 986 MobiDBLite consensus disorder prediction 1 119 - -
Eupl07g00528 986 Gene3D - 233 497 IPR027417 -
Eupl07g00528 986 MobiDBLite consensus disorder prediction 100 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00528 348 579 Core DNA Replication Machinery Family AT5G22010 27.016 2.44e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00528 K11269 - nnu:104585833 1340.48