Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00519 ATGGCTGACGCATTTATCAACTTCTCAGAGGAAATCCTGAGGAAATTGAACTCCATTGCTGCCGAAGGGATTAGTCTAGCATGGGGCCTCAGGGGAGATCTTAAAAAGCTTCATACAACAATGTCTACGATTCAACTCGTACTAGAGGACGCTGAAACGCGTCAAGTGAAGGACGAGGCCGTGAAACGTTGGTTGAAAAGGCTTAAAGATGTAGTATATGATGCGGATGACATATTTGATGAGTTTGCTTATGAAGCTTTGCGACGTAAAATGGAGATCCAAAACCACATGAAGAACAAGGTACACAACTTCTTTTCACTTTCAAACCCACTCGCATTTCGCTTCAAAATTACTCATAAAATTAAGGATTTAAATCGAATCTTAGATGATATTGCAAGGGAAAAAGAAAGGTTCCAATTTATCGCGAGACCTGTGGATATTGACAATCGAGAAAAATTCTCTTTTGCAGATGATTCGGAAGTCGTTGGGAGGCAAAATGATAACTTAGTGATAGTAGATATGTTAATTAATTCAAATCCTCAAGATGAGGTTTCAGTCATTCCCATTGTGGGTATTGGGGGCATTGGGAAGACAACTCTTGCTCAATTTGTCTACAATGATAAGTTGATAGAGGGGCACTTTGAATTAAGAATTTGGGTTTGTGTGTCTGAAGATTTCGATATTGAAAGGCTTTTAAGAGAAATTACTGAATCTTCTTTTAAGAGATTTTTACTCGTACTAGATGACGTGAGGAACGAGGATCATGAGAAGTGGGATAGATTGATAATTTTTTTAAGAAGTGGTGGTTTTGATGGAAGTAAAATCATTGTAACTACACGTAGCGATAATGTTGCATCATTAATCATCGGGACACTTCCTACGCACCATTTGCAAAATTTATCCGAAGATGAATGTTGGTCTTTATTCAAGCAAAGAGCATTTGGAATTGAAGGGACAAAAGAAACTCCAAATTTGGTGGCAATTGGGAGGGAGATAGTGAAAAAGTGTGGAGGTGTGCCTCTAGCAGCAAAGGCTGTGGGAAGTTTGATGCGCTTTAAAAGGGAGGAATATGAGTGGCTCTATACCAAAGATAGTAAATTTTGGGATCTAGCTGGTGTTAACAATGAAATCTTCTCATTAATGTGGAGTCATGATAATTTTCCACTACATTTAAGACAGTGTTTCTCATATTGTTCCATGTTTCCCAAGGGTCACAAGATTAACAAAAAGATGCTAATTCAATTATGGATGGCTGAAGGGTTCCTTCAACCATATGAAGGAGATGTAGAGAAAGTGATGGAGGATATGGGAAATGAATCTTTCAACCAGTTGTTGAAGATGAAGATGAAGATGAGGATGAAGATGAAGATGAAGATGAAGAGAGGATTAATGTTGATGTGGTGGAAAGCCTCCAACCTCACCGTAATTTGGAAATATTGGGTGTTTTAA 1449 0.383 MADAFINFSEEILRKLNSIAAEGISLAWGLRGDLKKLHTTMSTIQLVLEDAETRQVKDEAVKRWLKRLKDVVYDADDIFDEFAYEALRRKMEIQNHMKNKVHNFFSLSNPLAFRFKITHKIKDLNRILDDIAREKERFQFIARPVDIDNREKFSFADDSEVVGRQNDNLVIVDMLINSNPQDEVSVIPIVGIGGIGKTTLAQFVYNDKLIEGHFELRIWVCVSEDFDIERLLREITESSFKRFLLVLDDVRNEDHEKWDRLIIFLRSGGFDGSKIIVTTRSDNVASLIIGTLPTHHLQNLSEDECWSLFKQRAFGIEGTKETPNLVAIGREIVKKCGGVPLAAKAVGSLMRFKREEYEWLYTKDSKFWDLAGVNNEIFSLMWSHDNFPLHLRQCFSYCSMFPKGHKINKKMLIQLWMAEGFLQPYEGDVEKVMEDMGNESFNQLLKMKMKMRMKMKMKMKRGLMLMWWKASNLTVIWKYWVF* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00519 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 398 IPR027417 -
Eupl07g00519 482 Gene3D - 299 373 IPR042197 -
Eupl07g00519 482 CDD RX-CC_like 2 133 IPR038005 -
Eupl07g00519 482 Gene3D - 147 236 IPR027417 -
Eupl07g00519 482 Gene3D - 237 289 IPR027417 -
Eupl07g00519 482 Gene3D - 10 122 - -
Eupl07g00519 482 Pfam NB-ARC domain 241 363 IPR002182 GO:0043531
Eupl07g00519 482 Pfam NB-ARC domain 181 237 IPR002182 GO:0043531
Eupl07g00519 482 Gene3D - 379 459 IPR036388 -
Eupl07g00519 482 Pfam Rx N-terminal domain 12 96 IPR041118 -
Eupl07g00519 482 PANTHER DISEASE RESISTANCE PROTEIN RP 38 451 IPR044974 GO:0006952
Eupl07g00519 482 PRINTS Disease resistance protein signature 336 350 - -
Eupl07g00519 482 PRINTS Disease resistance protein signature 186 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00519 Eupl-Chr7 13543075 13544523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00519 169 427 WRKY Transcription Factor Family AT5G45050 27.586 2.62e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00519 - - msin:131226767 456.062