Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00462 ATGAATCTGAATCGCCTTTGCTTCATTTTACCGGCCGATGAATTAGAGCCGTCCGATCGTCATCAAACTCAGGCCTCAACTAAGAAAGACCACCACTTCCGCCACCGGGTTCTTACATTCGTTCGCCAATTGCTCCACCGTTTCTGTGACCGGAGATGGATCGGATTCTGTCACCATTACGCCATCGAAAAGCAGTTCTCAGGCAATTTTGAGGATATTTCTGGGGTTGTGCTGTCAGACAAGGTTGGTGGTAACAATCCAAGGATATTCAGCTACGCCGAGCTCTATATTGGTTCTAATGGATTTAGTGAGGATGAGGTGCTTGGGAGTGGCGGGTTCGGTCGTGTGTACAAAGCGGTGTTACCTAGTGATGACACTGTTGTTGCTGTTAAGTGTGTTGCTGAGAAAGGAGAGCGGTTCGAGAAGACGTTTGTGGCAGAGCTGGTGGCTGTGGCTCAGCTTCGCCACCGCAACCTTGTTCGGTTGAGGGGCTGGTGTGTTCATGAAGACCAACTACTCCTTGTCTATGATTATATGCCTAATCGAAGCCTCGACCGAATACTCTTCCGAAGACCGGAAATGGGTGTGGCACCTCTCAACTGGGACCGCCGCTGTCGAATTGTTTATGGTCTTGCAGCTGCACTGTTCTATCTGCACGAACAATTGGAGACGCAGATCATCCACCGTGACGTTAAGACGAGTAACGTGATGCTTGACTCTCATTACAACGCCCGGCTCGGCGACTTTGGTTTAGCCCGGTGGCTGGAACATGAACTTCAAGTCCCCACCTCATTACCTCCACCACCCACAATTAAGCAGCACCAGTTTCGGTTGGCCGAGACAACTAGGATTGGTGGCACAATTGGGTACCTGCCACCTGAGAGCTTCCAAAGACGCAGTGTCGCGACAGCAAAATCCGATGTGTTTAGCTTTGGCATCGTCGCGTTGGAAGTGGCATCGGGTCGACGAGCGGTTGACCTTACATACCCAGATGAGAAGATTATCCTGCTTGACTGGGTCCGGCGGCTTTCTGATGAAGGCAAGTATTTGCAAGCTGGAGATAGTCGGTTGCCAGACGGATCTTACAGGCTTTCTGATATGGAGAGGCTAATCCACCTTGGCCTTCTCTGCTCACTCAATGACCCGCAATTGCGACCCACCATGAAATGGGTTGTGGAAGCACTTTCCGGCAATATATTAGGCGAATTGCCGGCTCTCCCTTCGTTTCACTCCCACCCATTCTACATTTCTCTATCCTCCACCACCACCAGTACCAACAGTTGCACCAGCACCATGAGCAGAATCACTACAACAACAGCTACATCCACTTGGTCTAATTATGCCACAGCCGTTGGTGACACCATGTTTTTGACAGCTGACAATGGCAATGGCGACAGCAATGGCATCTCTAACGACAGCAGTCGCCGCCGTTCGATCAATTTCCCCTCAGTTGACACACCACAAGAAATAAGCTACAAGGATATCATTGCAGCCACAAACAATTTTTCAGAAGGCCGGAGGGTTGCAGAGATGGACTTTGGTACCGCCTACTATGGCTACCTCAACAATCGTCACCACATCTTGGTGAAGAGGCTTGGGATGAAGACATGCCCTGCACTACGGGCTCGCTTTTCTGACGAGCTTCGAAACCTTGGAAGGCTCCGCCACCGCAATCTAGTGCAGCTACGTGGGTGGTGCACTGAGCAAGGAGAGATGCTTGTTGTGTATGATTACTCGGCTCGTCAACAGCTCAGTCGCCTCCTCTTTCATCATCCCGAGAGCGGACAACCAGTCTTACTGTGGCGCCATCGGTACAACATAATCAAATCACTCGCATCTGCAATACATTATCTCCACGACGAATGGGACGAGCAGGTCATTCACAGAAACATCACCTCTTCGGCCATCATTCTTGATCCTGACATGAACCCACGCCTCAGTAGCTTTGCTCTTGCTGAATTCCTGACTCGAAACGAGCATGGCCATCACACAGTTGTCAATCCAAACAGGTCGGTTCGTGGGATATTTGGCTACATGTCACCTGAGTATATGGAATCTGGCGAGGCAACCCCTTTGGCCGATGTTTATAGCTTTGGAGTGGTAGTGCTTGAAGTGGTAAGTGGCCGAATGGCAGTTGACTTCCGGTGGCCCGAAGTGCTATTGGTAAAGAAGTTCCATGAATTCGAGGCCCGGAGGATGCCATTGGTGAAACTTGTGGATTGGAAGTTGGCCGGGGACTATGATCACAGGGAGTTGGTGAGGCTGGTAAGATTGGGGATGGCGTGCACTCGTTCAGACCCAGATTTGCGGCCGAGCATGAGGCAGATTGTCAGCATACTAGATGGAAATGACCAGTGGTTGAAGGAAACACAGAGGAAGGAGAGAGGGAAAGAATGGCAGCGCAGGAATGCTTGTTCTTTGTCATTGATCAGAAGGATTCAAGCTCTTGGTATACAATGA 2460 0.5041 MNLNRLCFILPADELEPSDRHQTQASTKKDHHFRHRVLTFVRQLLHRFCDRRWIGFCHHYAIEKQFSGNFEDISGVVLSDKVGGNNPRIFSYAELYIGSNGFSEDEVLGSGGFGRVYKAVLPSDDTVVAVKCVAEKGERFEKTFVAELVAVAQLRHRNLVRLRGWCVHEDQLLLVYDYMPNRSLDRILFRRPEMGVAPLNWDRRCRIVYGLAAALFYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGLARWLEHELQVPTSLPPPPTIKQHQFRLAETTRIGGTIGYLPPESFQRRSVATAKSDVFSFGIVALEVASGRRAVDLTYPDEKIILLDWVRRLSDEGKYLQAGDSRLPDGSYRLSDMERLIHLGLLCSLNDPQLRPTMKWVVEALSGNILGELPALPSFHSHPFYISLSSTTTSTNSCTSTMSRITTTTATSTWSNYATAVGDTMFLTADNGNGDSNGISNDSSRRRSINFPSVDTPQEISYKDIIAATNNFSEGRRVAEMDFGTAYYGYLNNRHHILVKRLGMKTCPALRARFSDELRNLGRLRHRNLVQLRGWCTEQGEMLVVYDYSARQQLSRLLFHHPESGQPVLLWRHRYNIIKSLASAIHYLHDEWDEQVIHRNITSSAIILDPDMNPRLSSFALAEFLTRNEHGHHTVVNPNRSVRGIFGYMSPEYMESGEATPLADVYSFGVVVLEVVSGRMAVDFRWPEVLLVKKFHEFEARRMPLVKLVDWKLAGDYDHRELVRLVRLGMACTRSDPDLRPSMRQIVSILDGNDQWLKETQRKERGKEWQRRNACSLSLIRRIQALGIQ* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00462 819 SMART serkin_6 102 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00462 819 PANTHER - 65 398 - -
Eupl07g00462 819 SUPERFAMILY Protein kinase-like (PK-like) 478 782 IPR011009 -
Eupl07g00462 819 Gene3D Phosphorylase Kinase; domain 1 77 178 - -
Eupl07g00462 819 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00462 819 Pfam Protein tyrosine and serine/threonine kinase 506 780 IPR001245 GO:0004672|GO:0006468
Eupl07g00462 819 CDD STKc_IRAK 513 782 - -
Eupl07g00462 819 Gene3D Phosphorylase Kinase; domain 1 466 578 - -
Eupl07g00462 819 ProSiteProfiles Protein kinase domain profile. 102 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00462 819 FunFam Receptor like protein kinase S.2 76 178 - -
Eupl07g00462 819 FunFam Receptor like protein kinase S.2 179 400 - -
Eupl07g00462 819 FunFam Receptor like protein kinase S.2 580 804 - -
Eupl07g00462 819 Gene3D Transferase(Phosphotransferase) domain 1 581 805 - -
Eupl07g00462 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Eupl07g00462 819 Pfam Protein kinase domain 103 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00462 819 SUPERFAMILY Protein kinase-like (PK-like) 86 410 IPR011009 -
Eupl07g00462 819 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Eupl07g00462 819 Gene3D Transferase(Phosphotransferase) domain 1 179 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00462 Eupl-Chr7 11741486 11744930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00462 492 783 Receptor kinase-like Gene Family AT3G53810 37.584 5.80e-52 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl07g00462 PK_Tyr_Ser-Thr 8.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00462 - - nnu:104602199 1197.96