Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00450 ATGGAGGAGCAGTCTCCCAAGATGACAAGCTACATGCTGAAAGAAATTCCATCTTATCTTCATGGAATTGCAACAGGAACACGATTGTTTGCCGATCCGATCATGTGGAGAGCACTTGCAGAAACTGGTTGTCATGATGGTGGGGGAGGATCTTCGTCATCGTCATCCGATCGACTGTTTTCAAGCCCGGAATCAAGTTCCTCGGTCGATGAGACTACTCCTGCCACTTTGAACAATAATGCTGCAGAATTCACTACTCAAATTATGGTCCCAGAACACCATACTAGTCCATTTGTTTCTATATCAAATTCTGCGAACCCAATTGGAGCTTCTGAAGTTAAAGGAAGCTTCATTCCTGTAAATTTCATAGAAATGTTCCCTGGGTTAGCTCAAGCCCAAGTGTCTCAATCACCTTCACCTTCATCTTCGCCATCAAAAGCTTCAAACCTCCCGAATTTAAATCTGTTTTTGCAGGAACCTACGCCCACCACCATAGAGCCCGCGACACATGTTGCCGAAACACTTGGCAAGAAGTACCAGAGGTGTCAACCCATGTTGTCCTCACCGAACCTGTTGTTCCCTGTCTCCAACCACGACCAAATTCAGCTTCAACCAGGACTGGAGTGGCTGAAGATCAATCAGAATTTCATGAATTATCCCTCAAAAGGCCCAAGCGATTACTGGCTCAGTGCTACCAAGACACAGCCAATGAAGTACACAGGAAGAAGAATGTATGATCATCACCAGAAGACGTCCTCATCGTCGGTATCCCCAGCAAAGCTCTTTAGAGGTGTGAGGCAAAGGCATTGGGGGAAGTGGGTGGCAGAGATCAGGTTACCAAAGAACCGAACAAGGGTGTGGTTAGGGACCTTCGACACCGCCGAAGAAGCGGCTTTTGCTTATGACACAGCTGCTTACAAGCTAAGAGGAGAGTATGCACATTTGAATTTTCCAGATCTCAAGCATCAACTCAAGGCCAGTTCTTCAAAAGGCAGCACCGCTGCACTTTTGGAAGCAAAGCTACAAGCCTTCTGTCAAGGAATTCCTTCTTCTCAGAAGAAACCCATTAACCAACCACCACCACCACCATCACCAAAGACACCCATATCTGCGAATCCAAACCTCAAACCATTGAAACAAAAGCCAACAAAAAAAGATTTGGAGAACAGAGTTGGGTCAGAGGTGGTAGTTGAGTGTAAGAAGACTCAGGAGTTGTTCTCAGATGTGGATGATGTTCTATTAAGTAGAATGCCTTCCTTGGACATGGACATGATCTGGGATGCCCTTCCTTTCTCTGATTCATGA 1305 0.459 MEEQSPKMTSYMLKEIPSYLHGIATGTRLFADPIMWRALAETGCHDGGGGSSSSSSDRLFSSPESSSSVDETTPATLNNNAAEFTTQIMVPEHHTSPFVSISNSANPIGASEVKGSFIPVNFIEMFPGLAQAQVSQSPSPSSSPSKASNLPNLNLFLQEPTPTTIEPATHVAETLGKKYQRCQPMLSSPNLLFPVSNHDQIQLQPGLEWLKINQNFMNYPSKGPSDYWLSATKTQPMKYTGRRMYDHHQKTSSSSVSPAKLFRGVRQRHWGKWVAEIRLPKNRTRVWLGTFDTAEEAAFAYDTAAYKLRGEYAHLNFPDLKHQLKASSSKGSTAALLEAKLQAFCQGIPSSQKKPINQPPPPPSPKTPISANPNLKPLKQKPTKKDLENRVGSEVVVECKKTQELFSDVDDVLLSRMPSLDMDMIWDALPFSDS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00450 434 PRINTS Ethylene responsive element binding protein signature 262 273 IPR001471 GO:0003700|GO:0006355
Eupl07g00450 434 PRINTS Ethylene responsive element binding protein signature 284 300 IPR001471 GO:0003700|GO:0006355
Eupl07g00450 434 MobiDBLite consensus disorder prediction 349 391 - -
Eupl07g00450 434 MobiDBLite consensus disorder prediction 133 152 - -
Eupl07g00450 434 FunFam Ethylene-responsive transcription factor 2 260 319 - -
Eupl07g00450 434 SUPERFAMILY DNA-binding domain 261 319 IPR016177 GO:0003677
Eupl07g00450 434 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 97 429 - -
Eupl07g00450 434 CDD AP2 260 320 IPR001471 GO:0003700|GO:0006355
Eupl07g00450 434 SMART rav1_2 261 324 IPR001471 GO:0003700|GO:0006355
Eupl07g00450 434 MobiDBLite consensus disorder prediction 45 75 - -
Eupl07g00450 434 Gene3D AP2/ERF domain 261 319 IPR036955 GO:0003700|GO:0006355
Eupl07g00450 434 Pfam AP2 domain 262 311 IPR001471 GO:0003700|GO:0006355
Eupl07g00450 434 ProSiteProfiles AP2/ERF domain profile. 261 318 IPR001471 GO:0003700|GO:0006355
Eupl07g00450 434 MobiDBLite consensus disorder prediction 354 370 - -
Eupl07g00450 434 MobiDBLite consensus disorder prediction 47 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00450 Eupl-Chr7 11055534 11057254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00450 118 434 AP2-EREBP Transcription Factor Family AT4G13620 44.795 5.64e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl07g00450 AP2 2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00450 - - tss:122653748 451.825