Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00431 ATGGGTATCTCACGAGATTCCATGCACAAGAGGCGCGCAACTGGAGGAAAGAAGAAAGCTTGGAGGAAGAAGAGAAAGTACGAGCTTGGTCGCCAGCCTGCAAACACCAAGCTCTCGAGCAATAAGACGGTGAGGAGAGTCCGTGTGAGAGGAGGTAACGTGAAATGGAGAGCCCTCAGATTGGACACCGGGAATTTCTCGTGGGGTAGTGAGGCCGTCACCCGTAAGACTCGCCTTCTTGATGTGGTTTACAACGCTTCCAACAATGAGCTCGTCCGGACACAGACCTTGGTGAAGAGCGCAATTGTTCAGGTCGATGCCGCGCCTTTCAAGCAATGGTACCTTCAGCATTACGGCGTTGATATCGGGAGGAAGAAGAAGGCAGCTGCTAAGAAGGAAACTACAGAGGGGCAGGAGGGAGATGCTATTGCAGAGGAAACCAAGAAGAGCAACCATGTTCTCAGGAAACTTGAGAAGCGTCAGCAGGATCATAAACTTGACTCCCACATTGAAGAACAGTTTGGTGGAGGTAGGTTGTTGGCCTGCATCTCTTCTCGCCCTGGTCAATGCGGTAGAGCCGACGGGTATATCTTGGAGGGAAAAGAGCTTGAGTTTTATATGAAGAAGCTCCAGAGGAAGAAGGGTAAAAGTGGTGCCGGTGCTACTGCTTAG 672 0.5104 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKAAAKKETTEGQEGDAIAEETKKSNHVLRKLEKRQQDHKLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSGAGATA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00431 223 Gene3D - 163 214 - -
Eupl07g00431 223 Pfam Ribosomal protein S8e 5 198 IPR022309 -
Eupl07g00431 223 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Eupl07g00431 223 Gene3D - 32 162 - -
Eupl07g00431 223 FunFam 40S ribosomal protein S8 32 162 - -
Eupl07g00431 223 FunFam 40S ribosomal protein S8 163 216 - -
Eupl07g00431 223 MobiDBLite consensus disorder prediction 11 26 - -
Eupl07g00431 223 NCBIfam ribosomal protein eS8 1 200 IPR001047 GO:0003735|GO:0005840|GO:0006412
Eupl07g00431 223 CDD Ribosomal_S8e_like 5 198 - -
Eupl07g00431 223 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 IPR001047 GO:0003735|GO:0005840|GO:0006412
Eupl07g00431 223 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00431 Eupl-Chr7 10407712 10414176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00431 1 207 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.575 5.34e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00431 K02995 - nnu:104587304 381.719