Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl07g00430 | ATGGATGAGGATTTCGACATCCCAGCAGCGGAGGAGATGAACGGGGACATGGATCTCCCGGACGAGAGTCCGATTCTTAAAGTCGGAGAGGAGAAGGAGATCGGGAACGAGGGTTTGAAGAAGAAGCTTGTCAAGGAAGGTGAAGGTTGGGATACTCCCGAGAACGGCGACGAAGTTGAAGTACATTATACTGGAACTCTGCTCGATGGGACCCAGTTCGACTCGAGCCGGGACAGGGGCGAACCATTCAAGTTCACGCTTGGCCAAGGGCAAGTGATCAAGGGATGGGACCTAGGAATCAAGACTATGAAGAAGGGTGAGAATGCCATCTTCACCATCCCTCCTGAGCTGGCCTACGGTGAGTCAGGCTCTCCTCCAACCATTCCTCCCAGTGCTACTCTCCAGTTCGATGTTGAGCTGCTGTCCTGGTCCAGTGTCAAGGACATATGCAAGGATGGAGGGATTTTCAAGAAGATACTCACTGCAGGAGAGAAATGGGAGAACCCCAAAGATCCAGATGAAGTGTTAGTTAAGTACGAAGCTCGGCTTGAAGATGGAACTTTGGTTTCAAAGTCTGAAGGGGTGGAGTTCACTGTCAGAGTTGGGCATTTCTGTCCCGCACTCTCGAAAACTGTAAAAACGATGAAGAAGGGAGAAAAGGTCCTCTTGACAGTGAAGCCACAATATGGTTTTGGGGAAAAGGGTAGGCCAGCCTCTGGTGATGAAGGTGCCATCCCACCAAATGCCATCCTTCAGATAACTCTTGAGTTGGATTCTTGGAAGACTGTGACAGAGGTAACTGATGACAAGAAGGTTTTAAAGAAGATCCTCAAGGAAGGAGAGGGTTATGAGCGTCCGAATGAGGGAACTGTGGTCAAAGTAAAATTGATTGGGAAGCTGCAAGATGGAACCGTGTTTCTGAAGAAGGGTCATGATGAGGAAGAGCCCTTTGAGTTCAAGTCCGATGAGGAACAAGTTATTGACGGACTTGACAAAACTGTGATGACTATGAAGAAAGGAGAGGTTGCACTGGTGACAATTGCACCAGAATATGCTTTTGGTTCATCTGAATCGCAACAAGAATTGGCTGCTGTTCCTCCCAATTCAACCGTGTTCTATGAGGTTGAGCTTGTATCCTTTATAAAGGAGAAAGAATCATGGGATATGAACACCCCGGAGAAGATTGAAGCTGCTGGGAGGAAGAAGGAAGAAGGAAACACACTGTTCAAAGCGGGTAAATATACTAGGGCATCCAAGAGATATGAGAAGGCTGCAAAGTTCATTGAATACGACACTTCCTTTGGTGAAGAGGAGAAGAAGCAGGCCAAGGCGCTAAAAGTCACTTGCAACCTCAACAATGCGGCTTGCAAGCTGAAACTTAAAGACTACAAGCAGGCTGAAAAGCTCTGCACCAAGGTTTTAGAACTTGAGACCAGGAATGTGAAGGCACTTTACAGGAGGGCCCAAGCATATATCCAGTTGGCAGATCTTGACCTGGCTGAGATGGATATCAAAAAGGCACTTGAAATTGATCCAGATAACAGGGATGTGAAGCAGGAATATAAGGTTCTGAAAGACAAGGTAAAGGAGTACAACAAGAAGGATGCCAAGTTCTATGGAAACATGTTTTCGAGGATGAGCAAGTTAGAACAGCTTGACACAAACGTAAGTCAGTCCGAGATGAAAGTTGTGTTCTTTGTGTTTCTTAGTCTTGTTTCTGTATTGGAATCCTCACACAATTCTTGTTGTTCTTGTTTATAA | 1761 | 0.4622 | MDEDFDIPAAEEMNGDMDLPDESPILKVGEEKEIGNEGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRGEPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPPELAYGESGSPPTIPPSATLQFDVELLSWSSVKDICKDGGIFKKILTAGEKWENPKDPDEVLVKYEARLEDGTLVSKSEGVEFTVRVGHFCPALSKTVKTMKKGEKVLLTVKPQYGFGEKGRPASGDEGAIPPNAILQITLELDSWKTVTEVTDDKKVLKKILKEGEGYERPNEGTVVKVKLIGKLQDGTVFLKKGHDEEEPFEFKSDEEQVIDGLDKTVMTMKKGEVALVTIAPEYAFGSSESQQELAAVPPNSTVFYEVELVSFIKEKESWDMNTPEKIEAAGRKKEEGNTLFKAGKYTRASKRYEKAAKFIEYDTSFGEEEKKQAKALKVTCNLNNAACKLKLKDYKQAEKLCTKVLELETRNVKALYRRAQAYIQLADLDLAEMDIKKALEIDPDNRDVKQEYKVLKDKVKEYNKKDAKFYGNMFSRMSKLEQLDTNVSQSEMKVVFFVFLSLVSVLESSHNSCCSCL* | 587 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl07g00430 | 586 | SUPERFAMILY | FKBP-like | 267 | 398 | - | - | |
| Eupl07g00430 | 586 | FunFam | Peptidylprolyl isomerase | 148 | 261 | - | - | |
| Eupl07g00430 | 586 | SUPERFAMILY | FKBP-like | 33 | 148 | - | - | |
| Eupl07g00430 | 586 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 56 | 144 | IPR001179 | GO:0003755 | |
| Eupl07g00430 | 586 | SMART | tpr_5 | 398 | 431 | IPR019734 | GO:0005515 | |
| Eupl07g00430 | 586 | SMART | tpr_5 | 447 | 480 | IPR019734 | GO:0005515 | |
| Eupl07g00430 | 586 | SMART | tpr_5 | 481 | 514 | IPR019734 | GO:0005515 | |
| Eupl07g00430 | 586 | FunFam | Peptidylprolyl isomerase | 386 | 541 | - | - | |
| Eupl07g00430 | 586 | SUPERFAMILY | FKBP-like | 149 | 265 | - | - | |
| Eupl07g00430 | 586 | FunFam | Peptidylprolyl isomerase | 29 | 147 | - | - | |
| Eupl07g00430 | 586 | Gene3D | - | 32 | 147 | IPR046357 | GO:0003755 | |
| Eupl07g00430 | 586 | Coils | Coil | 514 | 534 | - | - | |
| Eupl07g00430 | 586 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 289 | 381 | IPR001179 | GO:0003755 | |
| Eupl07g00430 | 586 | SUPERFAMILY | TPR-like | 387 | 545 | IPR011990 | GO:0005515 | |
| Eupl07g00430 | 586 | Pfam | Tetratricopeptide repeat | 481 | 514 | IPR001440 | GO:0005515 | |
| Eupl07g00430 | 586 | Gene3D | Tetratricopeptide repeat domain | 384 | 541 | IPR011990 | GO:0005515 | |
| Eupl07g00430 | 586 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 31 | 145 | - | - | |
| Eupl07g00430 | 586 | FunFam | Peptidylprolyl isomerase | 262 | 383 | - | - | |
| Eupl07g00430 | 586 | Gene3D | - | 148 | 261 | IPR046357 | GO:0003755 | |
| Eupl07g00430 | 586 | ProSiteProfiles | TPR repeat profile. | 481 | 514 | IPR019734 | GO:0005515 | |
| Eupl07g00430 | 586 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Eupl07g00430 | 586 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Eupl07g00430 | 586 | Gene3D | - | 262 | 383 | IPR046357 | GO:0003755 | |
| Eupl07g00430 | 586 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 283 | 378 | IPR001179 | GO:0003755 | |
| Eupl07g00430 | 586 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 167 | 257 | IPR001179 | GO:0003755 | |
| Eupl07g00430 | 586 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 52 | 141 | IPR001179 | GO:0003755 | |
| Eupl07g00430 | 586 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 172 | 261 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Eupl07g00430 | Eupl-Chr7 | 10357387 | 10364892 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Eupl07g00430 | 1 | 555 | Calmodulin-binding Proteins | AT3G25230 | 79.032 | 0.0 | 882 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl07g00430 | K09571 | - | nnu:104590254 | 993.801 |