Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00417 ATGGAAGAACGGAAAACAATATTCGCTTTCTCCATTGTCTTCTTATCTTCATTTCTCTTCTCTGCCACGCTCGCCGACGATGCTGCCGTCATGCAAAAGCTCGCTGCCTCTCTTTCTCCACCAGGCTGGTCAGGATCCGACCCCTGTACCTGGTCCGGCGTGAACTGCGACGACGCGGACCGTGTCACTTCCATCAACCTTAACTCCAAATCTCTCTCCGGATCTCTTCCTTCAGGTCTCGATCAACTCACCTTACTCAAATCTCTCGCCCTCCAAAACAACAAAATCTCCGGTCCGATGCCTTCTCTTGCAAATCTCACGAATCTTCAACAAATCTTTCTTGACAGTAACAATTTCACCTCCGTCCCGCCTTCAATCTTTTCTGGATTAACCAGTCTTCAGACATTGAGCCTCAGCGAGAATACTGATTTAGAACCATGGTTTCTTCCTCTAGATCTGACTCAATCTGGGAGTTTAGTCACATTGTATGTTAGCAAGACTAATCTTATGGGTACAATGCCGGATTTCTTCGGTTCTTTCCCGAGTTTGCAATCTTTGAGGCTTTCTTATAACAATCTCACTGGTCCTCTTCCGCCTTCTCTTGCTGGATCTGGGATTCGAAGCTTGTGGCTTAATAATCAGGTTCTTGGTCTTTCTGGATCGATTGATGTTTTGGGAACAATGACGCAGCTCTCACAGGTATGGTTACATTCGAATGCCTTCACTGGTCCGATTCCAGATCTTTCCAATTGCACGTCACTCTTCGATCTGTCGCTCCGCGACAATCAACTCACCGGTGTGGTGTTGCCTTCGTTAACCTCGCTTTCTCCATTGCGTAATGTATCTTTAGCAAACAATAAGTTACAAGGACCTTATCCAGCGTTTAAGGATGGAGTTATAGTTAATCTTGGCTCGACGAATAGTTTTTGTAACTCGAAGCCAGGTCCCTGTGATCCTCAAGTGACGACATTGCTGGAAGTTGCAGGAGCCCTTGGTTATCCGATGACCTTGGCGGAATCATGGGAAGGTAATAATGCTTGCTCAGGGTGGAGTTTTATTACATGTGATCCAGACAGGAAAAATGTTACTGTAATTAACTTTGCGAAGCGGCAGTTTAGGGGAACCATCTCGCCTGTTATAGCGAATCTATCCTCATTGAAGAGTTTGCTCTTGAATGACAATATTCTCACTGGTCCGATACCGGATAGCTTGACAGGTCTAACTCAGCTTCAGGTTCTTGATGTCTCTAACAACAATCTTACTGGGAAAATTCCAGTATTTCCCTCAAAAGTGACAGTGAGAACATCAGGTAATAGTCTTCTGGGTCCCAATTCAACGTCTGGAGGCGGGGATGGGGGAAGTCCTGGTTCTGGTTCTGGTTCCGGTTCCGATTCCAGCGCAACTCCGCCTTCAGGAAGTCAATCTCCGAAGCCGTCTTCTGTTTCAACTGGTATGATTGCTGGTACAGTTATTGCTGTTGTGGTTTTTATTGGTTTTGTATTGTTTATCTCCTTCAAATGCTACAAAAAGAAACGCCACCAGAAGTTTGGGCGGGTGCATAGCCCTCGAAATGGGAAGGAAATTGTGAAAAATGGCATAATTGGTACCATGAATGGGTATGGTGGGGTTGCGATCGAAGTGCATAGTCAGAGCAGTGGCGATAACAGTGATGTCCAATTCGGCGACGGTGGAAATGTTGCTATTTCAATCCAGGTTCTTCGACAAGTAACAGACAACTTCAGTGAAAACAACATATTGGGTAGGGGAGGATTTGGGGTTGTTTACAAAGGTGAACTCCATGATGGAACACAGATAGCCGTGAAGAGGATGGAATCTACTGAGATGGGTACAAAGGGGTTGAATGAGTTTCAGGCAGAGATTGCAGTTCTCACAAAGGTCAGACACAGGCATCTGGTCGCACTTTTGGGCTTCTGTATCAATGGAAATGAGAGGCTTTTGGTCTATGAGTATATGCCACAAGGTACTTTGAGTCAGCATTTATTCGATTGGATGGAGTATGGGTATACTCCTCTTACATGGAAGCAGAGGGTGACAATAGCACTAGACGTAGCTAGAGGGGTCGAGTATCTACATGGCTTAGCACAGCAGAGTTTCATCCATAGAGATTTGAAGCCTTCGAACATACTTCTTGGGGATGACATGAGAGCAAAGGTTTCAGATTTTGGTCTTGTTAAGAATGCCCCTGATGGGAAGTACTCTGTTGAGACACGATTGGCAGGGACATTTGGATATCTTGCACCAGAATATGCTGCTACAGGAAGAGTGACCACAAAGGTTGATGTTTATGCATTTGGGGTGGTCTTAATGGAGCTGCTCACGGGTAGAAAAGCACTAGATGAGAATATGCCAGAGGAGAGATCTCATCTTGTCACATGGTTCCGTAGGGTCCTGATCAACAAGGACAACATCAGAAAGGCTATTGATTCCACCCTCGACCCTGATGATGAGACTTATGGGAACGTCTGCTTGGTGGCAGAGCTAGCAGGTCACTGCACTGCTCGCGAGCCGTCTCAGAGGCCAGACATGGGCCACGCAGTTAACATCTTGGGTCCTCTTGTAGAGCAGTGGAAACCCACCTCTCATGAAGAAGAAGATAACTTTGGCATTGACCTTGATTTGAGCCTTCCTCAAGCCCTACAGAGATGGCAAGCGAACGAAGGCCCTTCCACAATGATCGGTGACTACAGCGGCATGACAAGCCTTGGAAACACTCAATCGAGCATACCCACAAAGCCGACAGGTTTTGCTGACACATTCGATACACTGGATGGCCGATGA 2799 0.4634 MEERKTIFAFSIVFLSSFLFSATLADDAAVMQKLAASLSPPGWSGSDPCTWSGVNCDDADRVTSINLNSKSLSGSLPSGLDQLTLLKSLALQNNKISGPMPSLANLTNLQQIFLDSNNFTSVPPSIFSGLTSLQTLSLSENTDLEPWFLPLDLTQSGSLVTLYVSKTNLMGTMPDFFGSFPSLQSLRLSYNNLTGPLPPSLAGSGIRSLWLNNQVLGLSGSIDVLGTMTQLSQVWLHSNAFTGPIPDLSNCTSLFDLSLRDNQLTGVVLPSLTSLSPLRNVSLANNKLQGPYPAFKDGVIVNLGSTNSFCNSKPGPCDPQVTTLLEVAGALGYPMTLAESWEGNNACSGWSFITCDPDRKNVTVINFAKRQFRGTISPVIANLSSLKSLLLNDNILTGPIPDSLTGLTQLQVLDVSNNNLTGKIPVFPSKVTVRTSGNSLLGPNSTSGGGDGGSPGSGSGSGSDSSATPPSGSQSPKPSSVSTGMIAGTVIAVVVFIGFVLFISFKCYKKKRHQKFGRVHSPRNGKEIVKNGIIGTMNGYGGVAIEVHSQSSGDNSDVQFGDGGNVAISIQVLRQVTDNFSENNILGRGGFGVVYKGELHDGTQIAVKRMESTEMGTKGLNEFQAEIAVLTKVRHRHLVALLGFCINGNERLLVYEYMPQGTLSQHLFDWMEYGYTPLTWKQRVTIALDVARGVEYLHGLAQQSFIHRDLKPSNILLGDDMRAKVSDFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELLTGRKALDENMPEERSHLVTWFRRVLINKDNIRKAIDSTLDPDDETYGNVCLVAELAGHCTAREPSQRPDMGHAVNILGPLVEQWKPTSHEEEDNFGIDLDLSLPQALQRWQANEGPSTMIGDYSGMTSLGNTQSSIPTKPTGFADTFDTLDGR* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00417 932 MobiDBLite consensus disorder prediction 437 481 - -
Eupl07g00417 932 SUPERFAMILY Protein kinase-like (PK-like) 561 856 IPR011009 -
Eupl07g00417 932 SMART LRR_typ_2 180 204 IPR003591 -
Eupl07g00417 932 SMART LRR_typ_2 106 129 IPR003591 -
Eupl07g00417 932 SMART LRR_typ_2 407 429 IPR003591 -
Eupl07g00417 932 ProSiteProfiles Protein kinase domain profile. 580 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00417 932 FunFam Receptor-like kinase TMK4 25 315 - -
Eupl07g00417 932 Gene3D Transferase(Phosphotransferase) domain 1 658 881 - -
Eupl07g00417 932 Gene3D Ribonuclease Inhibitor 22 314 IPR032675 -
Eupl07g00417 932 FunFam receptor protein kinase TMK1 542 657 - -
Eupl07g00417 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Eupl07g00417 932 SMART serkin_6 580 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00417 932 MobiDBLite consensus disorder prediction 911 932 - -
Eupl07g00417 932 Pfam Protein tyrosine and serine/threonine kinase 583 851 IPR001245 GO:0004672|GO:0006468
Eupl07g00417 932 FunFam Leucine-rich repeat receptor-like kinase 319 444 - -
Eupl07g00417 932 ProSitePatterns Protein kinases ATP-binding region signature. 586 608 IPR017441 GO:0005524
Eupl07g00417 932 Pfam Leucine rich repeat N-terminal domain 25 57 IPR013210 -
Eupl07g00417 932 Pfam Leucine rich repeat N-terminal domain 318 356 IPR013210 -
Eupl07g00417 932 FunFam receptor protein kinase TMK1 658 875 - -
Eupl07g00417 932 Gene3D Ribonuclease Inhibitor 319 444 IPR032675 -
Eupl07g00417 932 PANTHER OSJNBA0070M12.3 PROTEIN 11 932 - -
Eupl07g00417 932 CDD STKc_IRAK 586 859 - -
Eupl07g00417 932 SUPERFAMILY L domain-like 56 428 - -
Eupl07g00417 932 Pfam Leucine rich repeat 108 142 IPR001611 GO:0005515
Eupl07g00417 932 Gene3D Phosphorylase Kinase; domain 1 543 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00417 Eupl-Chr7 9918041 9922050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00417 45 856 Receptor kinase-like Gene Family AT5G49660 30.087 2.95e-93 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Eupl07g00417 PK_Tyr_Ser-Thr 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00417 - - nnu:104589794 1319.29