Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00407 ATGGAAGGTGGTGGCCAGAGCAGCGGTGCTGGAGGAGGAGGCCCAGCTCCGTTTCTTCTGAAGACTTACGACATGGTGGATGACTCATCGACGGACGACATCGTATCTTGGAGCTCAAACAAGAGCAGCTTCGTCGTCTGGAATCCGCCCGAGTTCGCTCGTCTCCTCCTCCCAACTTTCTTCAAACACAACAACTTCTCCAGCTTTATAAGGCAGCTCAACACCTACGGATTTCGAAAGATTGATCCGGAGAGGTGGGAGTTTGCTAATGAAGATTTTTCAAAGGACCAAAAGCATTTGCTTAAGAATATCCACCGCAGAAAGCCAATCCATAGTCACAGTCAACCACAAGGGTCCTTCGGGGATGCGGAAAGATCGGCACTGGATGAAGAAATTGAGAGGCTTGCACAAGAGAAATCTGCCCTTCAGACCAGTCTGTGGAGGTTCAAACAGCAGCATTCTGGAACAAAGTTTCAGTTGGAGGACTTGGAGCGAAGGCTACATGATATGGAGCAGAGGCAGCTGAGGATGATGTCTTTCTTGGCAAAGGCCGTTAATAACCCAACTTTTGTGGAGCATCTCATTAGAATGGCAGGTTCCTCTATGGACTTTTCAGCGATTAATAAAAAAAGGCGACTACCCATAGTTGATAACGTTCAGGAAGTTGCGGAAACTAGTTTTGTGGAAAACCATAGCAGTACTTCTAAGCCCGACTTCGGGCATATTTTCCACCGGGATTTCTCGGATAAGCTAAAACTTGAGTTATCACCAGCTGTATCAGACAGTAATTTGGTTTCCCTGAGTGCACAGAGCTCCAATGAAGATGGAGGGAGTTCACAGAAGAAAACATCTGAAGGAGACCCAAAGAATGCAAACATGCGAACAGGTCATTCATTTGCCCTGGAAACATTAGAGCTTTCAGATACCGGTACATCTTTAGCTTTGAGAAAGGATGCCTCTTTGTTGAGACAAGTGAGATTAAATGATTTGACTTCACCTGAAGAAGGTGATGGTCATATCTCCTGCCATTTAAATCTAACACTTGCCTCTTCTACATTGCAAGTCAACAACAGTCATAATTCGGCTAGAATTCCCCAGTTTAGTCAAGAAATTGATACACCTGCTGATTTGAGGTCTAGTGCCAATGGTAAAGAAGCTGATCTCAGAGTTGTCGCAAAGCACAGAAATTTCACTCATGACGATGCGACCATGTCACCTTCACAAGAGGCCCCAATTAATAATCAAGGGCCTGCAGCTGTTCAGGGCCGAGTGAATGATGTATTCTGGGAACAGTTCCTAACTGAAAGGCCAGGCTCTTCAGATACTGAAGAGGCAAGCTCTAGTTTTAGAGCAAACCCATATGATGAGCAAGAAGAGAGAAAGCCAGGGAATGGGAAGTCATGGAGAAATAGAAAAGATATGGAGCAGCTCACTCTCTGA 1440 0.4549 MEGGGQSSGAGGGGPAPFLLKTYDMVDDSSTDDIVSWSSNKSSFVVWNPPEFARLLLPTFFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFSKDQKHLLKNIHRRKPIHSHSQPQGSFGDAERSALDEEIERLAQEKSALQTSLWRFKQQHSGTKFQLEDLERRLHDMEQRQLRMMSFLAKAVNNPTFVEHLIRMAGSSMDFSAINKKRRLPIVDNVQEVAETSFVENHSSTSKPDFGHIFHRDFSDKLKLELSPAVSDSNLVSLSAQSSNEDGGSSQKKTSEGDPKNANMRTGHSFALETLELSDTGTSLALRKDASLLRQVRLNDLTSPEEGDGHISCHLNLTLASSTLQVNNSHNSARIPQFSQEIDTPADLRSSANGKEADLRVVAKHRNFTHDDATMSPSQEAPINNQGPAAVQGRVNDVFWEQFLTERPGSSDTEEASSSFRANPYDEQEERKPGNGKSWRNRKDMEQLTL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00407 479 SMART hsfneu3 14 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00407 479 MobiDBLite consensus disorder prediction 434 479 - -
Eupl07g00407 479 Coils Coil 125 145 - -
Eupl07g00407 479 Gene3D - 13 108 IPR036388 -
Eupl07g00407 479 Coils Coil 153 173 - -
Eupl07g00407 479 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 270 IPR027725 -
Eupl07g00407 479 SUPERFAMILY "Winged helix" DNA-binding domain 14 107 IPR036390 -
Eupl07g00407 479 ProSitePatterns HSF-type DNA-binding domain signature. 57 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00407 479 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00407 479 PRINTS Heat shock factor (HSF) domain signature 18 41 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00407 479 PRINTS Heat shock factor (HSF) domain signature 56 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00407 479 MobiDBLite consensus disorder prediction 106 125 - -
Eupl07g00407 479 MobiDBLite consensus disorder prediction 453 479 - -
Eupl07g00407 479 MobiDBLite consensus disorder prediction 266 291 - -
Eupl07g00407 479 Pfam HSF-type DNA-binding 18 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl07g00407 479 MobiDBLite consensus disorder prediction 435 452 - -
Eupl07g00407 479 MobiDBLite consensus disorder prediction 266 294 - -
Eupl07g00407 479 FunFam Heat shock transcription factor 1 11 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00407 Eupl-Chr7 9597602 9610866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00407 18 479 HSF AT4G13980 52.431 6.14e-153 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl07g00407 HSF_DNA-bind 4.3e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00407 K09419 - ming:122091773 701.434