Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00401 ATGAAAAGTGGGCATTTCACAACATCTTACATTTCATGCTACAGTTTAGCAGTAATCTCTACTTACAGGATGTTTCTTGCTGCAATGCGTTTCAGATATAAAGTTATGAAAGAGCTTGGAGATGGAACTTGTGGAAATGTATATAAGGCACTCAATCTAGAAACAAATGAAATCGTTGCCATCAAGAAAATGAAGAGAAAGTTTTACTTTTGGGAGGAGTGTATGAATCTACGCGAAGTAAAGTCCCTTAGAAAATTGAATCACCCTAACATTGTGAAGTTGAAGGAGATTGTTCGGGAAAACCATGAGCTTTTCTTCATATTTGAATACATGGAATATAATCTATACCAGATCATGAGAGACCGGCGAAGCCCTTTTCCTGAGGCAGAGATACGGAGCCTTATGTCTCAGGTGTTGCAAGGACTTGCGTATATGCACAGAAATGGATATTTTCATCGGGACCTCAAACCTGAGAATTTGCTGGTGACAAGTGACATTATAAAAATTGCTGATTTCGGATTGGCAAGAGAAGTAATGTCAAAGCCTCCATATACTGACTACGTTTCTACACGCTGGTACCGAGCACCAGAAGTGTTGTTGCAATCTTCATCATACACTCCTGCAATCGACATGTGGGCCATTGGTGCAATTCTAGCAGAGCTTTTCACATTGAGCCCTATTTTCCCTGGTGAAAGTGAACTAGACCAACTTTACAAAATATGCTGTGTTCTCGGTACTCCAGATTGGTCTACTTTGCCAGAAGGAATGAACTATTCACGGTTCATCAATGTTAATTTTTCAGAGATTGTGCCTGCCAATCTTTCAGATATCATTCCCAATGCTAGCTTGGAAGCAATTGATTTGATTATGCAACTATGCTCTTGGGACCCACTTAAGAGACCGACTGCAGAGCAATCACTACAACATCCCTTTTTCCATGTGGGAATGTGGGTTCCTTATCCACTCCGGGATCCTTTTCAGCCCAGGCCAAACCACACAGGAGGAAAGCCAAAGCTTGAGTTGAATCTATGGGACTTCAGTTCTGAACCAGATGATTGCTTTCTTGGCTTGACATTGGCAGTAAAGCCCAGTATTTCCAACATAGAGGTGGTTCATCAGGTCTCTCAAAATGCAAGAGAGGAAATATTATTTTGCCCTGGTTTTCAGGATCGTTCAGATCAGTCAGTGTTGTGGCCTCTACTATCAATCAATCAAAGTGGAAATGTACCGGTTAAGTCTTCCTTGCCATCATCTTACATGGGGAACAGTCAGGTTCCGCGTCCAATAATTGGGGTTCCGCAGTCTGCAGGATTCACCATTGCATCCTTGAATCCTGATATCCTAGACAGACCATTGATGGCGATCTCCTCACCCTTCCAGCAGGGTCATTTCAAGTGA 1398 0.422 MKSGHFTTSYISCYSLAVISTYRMFLAAMRFRYKVMKELGDGTCGNVYKALNLETNEIVAIKKMKRKFYFWEECMNLREVKSLRKLNHPNIVKLKEIVRENHELFFIFEYMEYNLYQIMRDRRSPFPEAEIRSLMSQVLQGLAYMHRNGYFHRDLKPENLLVTSDIIKIADFGLAREVMSKPPYTDYVSTRWYRAPEVLLQSSSYTPAIDMWAIGAILAELFTLSPIFPGESELDQLYKICCVLGTPDWSTLPEGMNYSRFINVNFSEIVPANLSDIIPNASLEAIDLIMQLCSWDPLKRPTAEQSLQHPFFHVGMWVPYPLRDPFQPRPNHTGGKPKLELNLWDFSSEPDDCFLGLTLAVKPSISNIEVVHQVSQNAREEILFCPGFQDRSDQSVLWPLLSINQSGNVPVKSSLPSSYMGNSQVPRPIIGVPQSAGFTIASLNPDILDRPLMAISSPFQQGHFK* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00401 465 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 340 - -
Eupl07g00401 465 ProSiteProfiles Protein kinase domain profile. 33 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00401 465 Pfam Protein kinase domain 33 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00401 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Eupl07g00401 465 SUPERFAMILY Protein kinase-like (PK-like) 30 313 IPR011009 -
Eupl07g00401 465 Gene3D Phosphorylase Kinase; domain 1 31 111 - -
Eupl07g00401 465 FunFam Serine/threonine-protein kinase MHK 30 112 - -
Eupl07g00401 465 Gene3D Transferase(Phosphotransferase) domain 1 112 316 - -
Eupl07g00401 465 FunFam serine/threonine-protein kinase MAK isoform X1 113 321 - -
Eupl07g00401 465 CDD STKc_MAK_like 33 312 - -
Eupl07g00401 465 SMART serkin_6 33 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00401 Eupl-Chr7 9466576 9490579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00401 32 312 Core Cell Cycle Gene Families AT1G66750 39.860 1.17e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Eupl07g00401 Pkinase 3.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00401 K08829 K08830 nnu:104587514 778.859