Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00391 ATGGCATTTTTCGGTAGAATTGGAAACCTTGTCAGGCAGAGCATGTCGCAAGACATTGTATCGAATCCAGTAATGCTTAATGCTGTTCGGAGTGTGTCAACTAAGCTTTTCGTTGGAGGTCTTTCATATGGGACTGATGACCAATCTCTTAGGGATGCATTTTCCAGCTTTGGTGATGTCACTGAAGCAAGAGTTATCACTGACAGAGACACCGGGAGGTCAAGGGGATTTGGGTTTGTGAACTACACCTCTGACGAATGTGCTACCTCAGCACTATCATCCATGGATGGCCAGGAACTGAATGGGCGGAACATTCGTGTAAGCTATGCTAATGACAGACCTAGTGGTCCCCGTACTGGTTATGGAGGTGGTGGTGGTGGTTATGGAGGTGGTGGCTATCGTGGGGAAGGAGGTTTCGGTGGTGGTGCAGGAAGAGATGATGGGTTCTAA 450 0.4822 MAFFGRIGNLVRQSMSQDIVSNPVMLNAVRSVSTKLFVGGLSYGTDDQSLRDAFSSFGDVTEARVITDRDTGRSRGFGFVNYTSDECATSALSSMDGQELNGRNIRVSYANDRPSGPRTGYGGGGGGYGGGGYRGEGGFGGGAGRDDGF* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00391 149 SMART rrm1_1 35 108 IPR000504 GO:0003723
Eupl07g00391 149 SUPERFAMILY RNA-binding domain, RBD 22 143 IPR035979 GO:0003676
Eupl07g00391 149 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 30 141 - -
Eupl07g00391 149 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 106 IPR000504 GO:0003723
Eupl07g00391 149 Gene3D - 8 147 IPR012677 -
Eupl07g00391 149 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
Eupl07g00391 149 MobiDBLite consensus disorder prediction 108 149 - -
Eupl07g00391 149 FunFam Glycine-rich RNA-binding protein 2 24 148 - -
Eupl07g00391 149 CDD RRM2_NsCP33_like 35 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00391 Eupl-Chr7 9130008 9133489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00391 33 122 Eukaryotic Initiation Factors Gene Family AT1G49760 41.111 2.01e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00391 - - nnu:104587516 182.185