Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00383 ATGAGCTATGGAGTGATCTCTGGACATAACGTCCACCTTCGCTGTTTTAAACTAAAACCCATTAATATCTCAACCAGAAGATCGGTGGGCGAAGCTTGCTTTTGTGTTTGCTTCAATACCCATAAGCAGCAGCAATTCAAACCAGGCTTTCTTCTGATCGAAGACCGTGTTGTTGTTGCTGGGTCTTACGGATTCAGAACAAAGGCCTCGATGAACGATGGCTTTGTGGTGGCTGAGAAGGCGACGGAGATGAGTTTCTATGAATTGTTGGGGATTCCAGAGAGCGGGAGCTTCTCGGAGATCAAACAAGCTTACAAACAGTTGGCACGCAAGTATCATCCGGACGTATCGCCTCCGGATCGGACGGAGGAGTATACGAGGAGATTTATTCAGGTTCAGGAGGCGTATGAGACGTTATCGGATCCGAGGAGGAGGGCTTTGTACGATAGGGACTTGGCCAGGGGTTTGCATCTCGCTTTCTCCGCTCGCAAACGCTACAACCACCAACACGATGAGGGATTGGAAGATAGAAGCGACTGGAGGAATCGTTGGCAGTCGCAACTTTCAGATTTGAAGAGAAGGAGCATGAACAACAATTCAAGAGATAACATGTCGTGGGGAGCTCGGATGCGCAGGCAAAGGAATGAATCAGTAGGAGAATAA 663 0.4842 MSYGVISGHNVHLRCFKLKPINISTRRSVGEACFCVCFNTHKQQQFKPGFLLIEDRVVVAGSYGFRTKASMNDGFVVAEKATEMSFYELLGIPESGSFSEIKQAYKQLARKYHPDVSPPDRTEEYTRRFIQVQEAYETLSDPRRRALYDRDLARGLHLAFSARKRYNHQHDEGLEDRSDWRNRWQSQLSDLKRRSMNNNSRDNMSWGARMRRQRNESVGE* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00383 220 ProSitePatterns Nt-dnaJ domain signature. 129 148 IPR018253 -
Eupl07g00383 220 PRINTS DnaJ domain signature 105 120 IPR001623 -
Eupl07g00383 220 PRINTS DnaJ domain signature 87 105 IPR001623 -
Eupl07g00383 220 PRINTS DnaJ domain signature 124 144 IPR001623 -
Eupl07g00383 220 PRINTS DnaJ domain signature 211 220 IPR001623 -
Eupl07g00383 220 SUPERFAMILY Chaperone J-domain 81 156 IPR036869 -
Eupl07g00383 220 CDD DnaJ 86 141 IPR001623 -
Eupl07g00383 220 Gene3D DnaJ domain 74 192 IPR036869 -
Eupl07g00383 220 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 68 217 - -
Eupl07g00383 220 MobiDBLite consensus disorder prediction 191 220 - -
Eupl07g00383 220 Pfam DnaJ domain 86 149 IPR001623 -
Eupl07g00383 220 ProSiteProfiles dnaJ domain profile. 85 152 IPR001623 -
Eupl07g00383 220 SMART dnaj_3 84 144 IPR001623 -
Eupl07g00383 220 FunFam Chaperone protein dnaJ 20, chloroplastic 70 182 - -
Eupl07g00383 220 MobiDBLite consensus disorder prediction 191 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00383 Eupl-Chr7 8967668 8969771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00383 87 149 C2H2 Transcription Factor Family AT1G74250 43.939 2.60e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00383 - - nnu:104589928 267.314