Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00369 ATGGCCGATTACCGGATTCCGTCCGAGAATTCGGCGTTCAAAGCTTACACCCCGAGGAACATAGCGGTCGATGTTGTTCGAGCATTCGAAATGTCGCAAATCGAGGCTTTACGAGCAAATTTAATCTTCGGTGTTGGAGACGAGTCGGGTTCTGAGGAAAACGAAGCGGTTTCGGATTGTCGGGTACTAGGTTTAGCTGTAAGTGTAGTAGCTGAGGAGGAAGAGATTCCAAGGAAGAGAGCCAAGTCTTGTCTTAAAATAGAAGGTGATGTGATTTCTCAATCCAGGCAACTCATGGAGGATAAGAAGAAATGTAAGGTGCAGGAGACACTTGAAAGTATGGTCCCCTTCGGATGTGTTGGATGTTCATCTTCCTCCACGCCCATATCATCAGGTTTCGAAGTGGGTTCTTCGAGCTCGAACATGGGCGTCGAGAATGGATATTCAACTTCCTCAAGGCTAGTATCATCAAGTATTCAAGACCGGGCTTCGAGCTCGAACAATGCCGCTAGTAACGCAGAACCAAACCAGCGGAAGTTACTCTTTGAGAAGACATTGTCCCCTAGTGATGTGGGTGAGTTCAACAGGCTCGTCGTCCCGAAAAAGTTCGCCATGGCCTACTTGCCTACTCTAAAGACGAACGATGATAATTACAAGAAAGAGACGCTAAAATTCTACGATAATCAAAACATGGCATGGGATATGACGTTCGAATTCTGGCCGGCGAGCCAAAGCTACGCGTTAACCAGGGGTTGGAAGGCATTCATAAATCACCATGGGTTGCAACATAGTGATGTAGTCTGTGTTTATGAACTTGAGCTAAACCCCAAGATTTATGGCATCGACTATCGCCGGCATCTTCGAGTCCCCAAGACAATTAGATTGTTTGGTGAAGACTACATTTACGAGTATACAAGTGCTAGTAATGGTGACGATGGCACTCAGAGCAACACCGGTCCACGTCGAAGAATTCGAAAAGGTTGCCGCAGAGGTAGAAGTCATCAATGA 1008 0.4653 MADYRIPSENSAFKAYTPRNIAVDVVRAFEMSQIEALRANLIFGVGDESGSEENEAVSDCRVLGLAVSVVAEEEEIPRKRAKSCLKIEGDVISQSRQLMEDKKKCKVQETLESMVPFGCVGCSSSSTPISSGFEVGSSSSNMGVENGYSTSSRLVSSSIQDRASSSNNAASNAEPNQRKLLFEKTLSPSDVGEFNRLVVPKKFAMAYLPTLKTNDDNYKKETLKFYDNQNMAWDMTFEFWPASQSYALTRGWKAFINHHGLQHSDVVCVYELELNPKIYGIDYRRHLRVPKTIRLFGEDYIYEYTSASNGDDGTQSNTGPRRRIRKGCRRGRSHQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00369 335 Gene3D - 169 290 IPR015300 -
Eupl07g00369 335 SMART B3_2 182 284 IPR003340 GO:0003677
Eupl07g00369 335 Pfam B3 DNA binding domain 182 270 IPR003340 GO:0003677
Eupl07g00369 335 MobiDBLite consensus disorder prediction 309 335 - -
Eupl07g00369 335 ProSiteProfiles B3 DNA-binding domain profile. 182 287 IPR003340 GO:0003677
Eupl07g00369 335 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 117 299 IPR044800 GO:0003700
Eupl07g00369 335 SUPERFAMILY DNA-binding pseudobarrel domain 178 270 IPR015300 -
Eupl07g00369 335 CDD B3_DNA 181 270 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00369 Eupl-Chr7 8683725 8688390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00369 181 274 RAV Transcription Factor Family AT1G51120 39.216 2.08e-20 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl07g00369 B3 2.5e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00369 K09287 - ming:122080338 157.147