Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00337 ATGAGCACACGCAGGCTGAGGCAACCTCTGAAAGGTTACGTGAGGGATAGTCGGCGGAGGAAGATGGGACTAGACGTGGACCTCAACGATGTACCTCCGGGTGAGTACCGGGCGGCGGCTCTGGAGGAGACCTCCACTCATGCCTCCGGTACGGAGGAAGTGCAAAGTAGCGGGCAAGCAGGAGGAGGGATTTTACCACCACCTGCTACAATTGATCTCGAGGCCATCGACGACGAAGTCATCATCTCCTCTCCGAGGAGCTTTGCTGAAGCTAGGAACAAATCCAGAAGGACCCATGGGGTGACAGTTGTGCTTGATGAAGATTCACAAGTCCACCAAGGCCACTCAGAGGAGTCAGTAACTATGTTGTCTCTCAATAGCTTCAACAAGCGTAGAAGAGTTCCACCAAATCAGACCATTATCAATTGTGAGCTTTACGTAAACTTGGAAGGCAGTAACAGTGCCAAGTGGCAGAGAAAGAACGGCACGAAGCCTCCAGAACCGTCCCAGAGTGTACCACCACCAAAGGAACCCACCTTCAGCTGCCCAGTTTGCATGGGCCCGCTGGTTGAGGAGATGTCAACAAAGTGTGGTCACATCTTCTGTAAGAAATGTATTAAGGCTGCCATAGCGGCCCAGAGTAAATGCCCTACCTGTAGGCGAAAGCTCACTGCAAAAGACACCATCAGGGTGTACCTTCCTTCCACCAGTTGA 714 0.5224 MSTRRLRQPLKGYVRDSRRRKMGLDVDLNDVPPGEYRAAALEETSTHASGTEEVQSSGQAGGGILPPPATIDLEAIDDEVIISSPRSFAEARNKSRRTHGVTVVLDEDSQVHQGHSEESVTMLSLNSFNKRRRVPPNQTIINCELYVNLEGSNSAKWQRKNGTKPPEPSQSVPPPKEPTFSCPVCMGPLVEEMSTKCGHIFCKKCIKAAIAAQSKCPTCRRKLTAKDTIRVYLPSTS* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00337 237 PANTHER ELFLESS, ISOFORM B 1 237 - -
Eupl07g00337 237 MobiDBLite consensus disorder prediction 1 65 - -
Eupl07g00337 237 SUPERFAMILY RING/U-box 181 226 - -
Eupl07g00337 237 MobiDBLite consensus disorder prediction 156 178 - -
Eupl07g00337 237 MobiDBLite consensus disorder prediction 9 26 - -
Eupl07g00337 237 ProSiteProfiles Zinc finger RING-type profile. 182 220 IPR001841 -
Eupl07g00337 237 SMART ring_2 182 219 IPR001841 -
Eupl07g00337 237 MobiDBLite consensus disorder prediction 44 58 - -
Eupl07g00337 237 Pfam Zinc finger, C3HC4 type (RING finger) 182 219 - -
Eupl07g00337 237 ProSitePatterns Zinc finger RING-type signature. 197 206 IPR017907 -
Eupl07g00337 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 235 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00337 1 236 C3H Transcription Factor Family AT5G48655 40.506 1.78e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00337 K22651 - nnu:104590197 328.946