Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00317 ATGGCTGTTCCGGAGGTTGACAAGAAATTGCTCGGGGAACTTGAATCAATGGGATTCCCTATAGCCCGAGCAACAAGGGCACTTCATTACTCTGGTAATGCTAGCCTTGAGGTTGCTATTAATTGGATTGTTGAACATGAGAATGACTTAGACATTGATCAAATGCCATTGGTACCTGTCAACATCAAAGTTGAGGCTTCTAAACCATCTCTTACTCCAGAGGAAATGAAGATTAAGGCACAAGAACTAAGGGAGCGAGCTCGTAAGAAGAAAGAAGAAGAAGAAAAGAGAATGGAAAGAGAAAAGGAGAAGGAGAGGATTCGTGCAGGTAAGGAAATTCTTGAAGCAAAGAGAATTGAGGAAGAAAATGAAAGAAAACGTATATTGGCCTTGCGGAAGGCAGAGAAAGAGGAAGAGAAAAGAGCGAGGGAGAAAATCCGACAGAAATTAGATGAAGATAAGGCAGAAAGAAGGCGCAAGCTTGGATTGCCACCGGAAGACCCTTCAGTTGTAAAGCCTGCCACACCAGTTGTGCAGGAAAAAAAGAGCTTACTCCCTGTTAAGCCTGCTACAAAGACAGAGCACATGAGAGATTGTTTGCGATCTCTCAAGCATACTCACAAGGATGATGATGCCAAAGTTAAGAGGGCATTCCAAACTCTTCTGACATATGTGGGTAATGTCGCAAAGAATCCCGATGAGGAGAAATTCAGAAAGATTCGACTCGATAACCCATCCTTTAAGGATAGAGTTGGTAGTTTGAAAGGAGGCGTTGAGTTTCTTGAGCTGTGTGGATTTGAGAAGAGTGAAGGGGGAGAGTTTTTGTTTCTTCCTAGGGACAAGGTGGACATGGCAGTGCTGAACTCAGCTGGGTCTGAGCTGAACTCAGCTATAGTTAATCCCTTCTTTGGCGTTCTCTGA 921 0.4376 MAVPEVDKKLLGELESMGFPIARATRALHYSGNASLEVAINWIVEHENDLDIDQMPLVPVNIKVEASKPSLTPEEMKIKAQELRERARKKKEEEEKRMEREKEKERIRAGKEILEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLDEDKAERRRKLGLPPEDPSVVKPATPVVQEKKSLLPVKPATKTEHMRDCLRSLKHTHKDDDAKVKRAFQTLLTYVGNVAKNPDEEKFRKIRLDNPSFKDRVGSLKGGVEFLELCGFEKSEGGEFLFLPRDKVDMAVLNSAGSELNSAIVNPFFGVL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00317 306 Coils Coil 77 156 - -
Eupl07g00317 306 Gene3D - 199 297 - -
Eupl07g00317 306 SMART PGNneu 216 279 - -
Eupl07g00317 306 MobiDBLite consensus disorder prediction 137 165 - -
Eupl07g00317 306 Pfam UBA/TS-N domain 11 43 IPR015940 -
Eupl07g00317 306 SUPERFAMILY PUG domain-like 203 298 IPR036339 -
Eupl07g00317 306 CDD UBA_PUB_plant 5 53 - -
Eupl07g00317 306 Pfam PUB domain 213 283 IPR018997 -
Eupl07g00317 306 SUPERFAMILY UBA-like 4 58 IPR009060 GO:0005515
Eupl07g00317 306 Gene3D - 7 53 - -
Eupl07g00317 306 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Eupl07g00317 306 MobiDBLite consensus disorder prediction 137 172 - -
Eupl07g00317 306 CDD PUB_UBA_plant 200 306 - -
Eupl07g00317 306 PANTHER F13M7.16 PROTEIN 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00317 Eupl-Chr7 7200517 7236539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00317 1 306 C2H2 Transcription Factor Family AT1G04850 78.571 2.36e-148 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00317 K24348 - msin:131246840 455.677