Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00313 ATGGCGGTTGTAGCGCAAGAGGTCAAGCTTTTCAATCGCTGGACTTTTGATGAAATTGAGGTCAGTGATATATCCCTGGCAGATTATGTTGCAGTCAATCAATCCAAGCATGCTACATATGTCCCGCACACTGCTGGCAGATACTCTGTCAAAAGGTTCCGTAAGGCCCAATGTCCCATTGTTGAGAGATTGACAAACTCTCTTATGATGCATGGTCGTAACAATGGCAAGAAACTCCTGGCAGTTCGCATTATCAAGCATGCGATGGAGATCATTCATCTCCTAACTGATCTAAACCCAATCCAAGTGATTGTTGATGCGGTCATCAACAGTGGGCCGAGGGAAGATGCTACGAGGATTGGTTCAGCCGGTGTTGTAAGGCGTCAGGCAGTTGATATCTCCCCGTTGAGGAGAGTAAACCAGGCAATTTACCTTCTCACAACTGGTGCCCGCGAGAGTGCTTTCAGAAACATCAAGACGGTCGCTGAGTGCCTTGCTGATGAGCTCATCAATGCAGCTAAAGGTTCTTCAAACAGCTATGCGATCAAGAAGAAGGATGAAATTGAACGTGTTGCCAAGGCAAATCGTTGA 591 0.467 MAVVAQEVKLFNRWTFDEIEVSDISLADYVAVNQSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLLAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTVAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00313 196 SUPERFAMILY Ribosomal protein S7 9 196 IPR036823 -
Eupl07g00313 196 Gene3D Ribosomal protein S7 domain 1 196 IPR036823 -
Eupl07g00313 196 PANTHER RIBOSOMAL PROTEIN S7 6 196 IPR000235 GO:0006412
Eupl07g00313 196 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 196 IPR000235 GO:0006412
Eupl07g00313 196 NCBIfam 30S ribosomal protein S7 7 196 IPR005716 GO:0003735|GO:0006412|GO:0015935
Eupl07g00313 196 CDD uS7_Eukaryote 9 196 IPR005716 GO:0003735|GO:0006412|GO:0015935
Eupl07g00313 196 FunFam 40S ribosomal protein S5 1 196 - -
Eupl07g00313 196 Pfam Ribosomal protein S7p/S5e 50 196 IPR023798 -
Eupl07g00313 196 ProSitePatterns Ribosomal protein S7 signature. 62 88 IPR020606 GO:0003723|GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00313 Eupl-Chr7 7128363 7132616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00313 4 196 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 88.083 2.60e-132 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00313 K02989 - msin:131239673 362.844