Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00308 ATGTCTGGAGTAGTTGCAGATCAAAGCACTAGTTTTAACAGACCCAGATTGGTGGTGAAGAGAGTCTTAGCCAAGCCTCAACATGAGGGAGATGGTGCTGTTGTTAGAAGAAGCATTGGAAGGATTGAATTGAAGAATTTGGATCCTTTTCTTATGTTGGATGAATTCTCAGTTTCAGCTCCTGCTGGATTTCCTGACCATCCACATAGAGGTTTTGAGACTGTTACATACATGTTACAAGGAGCTTTCACTCATCAAGATTTTGCAGGGCACAAAGGAACAATCAGAACTGGTGATGTACAGTGGATGACTGCTGGTAGAGGGATAATTCACTCAGAAATGCCAGCAGGAGAAGGAGCCCAGAGGGGATTGCAGCTTTGGATCAATCTATCATCCAGAGACAAAATGATTGAGCCTAGATACCAGGAGTTGCTAAGAGAAGACATCAAGAGAGCAGAGAAAGATGGGGTCGAGGTCCGAGTTATCGCAGGAGAAGCAATGGGCGTCCGATCGCCTGTATACACCAGGACACCCACAATGTACCTTGATTTCACTCTAAAACCAGGAGCCCAATTGCACCAAAGTATCCCAGACTCATGGATTTCCTTTGTGTATGTTGTCGAAGGCGAAGGAATTTTCGGTTCCTTGAACTCTTCCCCAGCTTCAGCTCACAATTGCCTAGTCTTAGGTCCTGGGGATGGGCTCAATGTATGGAACAAGTCTGGCAAGCCGCTTAGATTCGTACTGATCGGCGGGCAGCCTCTTAATGAACCTGTTGTTCAGTATGGGCCATTTGTGATGAACACACAAGCCGAGATCGATCAAACGATCGAGGACTATCACTTTTGTCGAAACGGATTCGAAAAGGCCAAGTCCTGGAAATCTCAATCACTGGGTTAG 900 0.46 MSGVVADQSTSFNRPRLVVKRVLAKPQHEGDGAVVRRSIGRIELKNLDPFLMLDEFSVSAPAGFPDHPHRGFETVTYMLQGAFTHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGAQRGLQLWINLSSRDKMIEPRYQELLREDIKRAEKDGVEVRVIAGEAMGVRSPVYTRTPTMYLDFTLKPGAQLHQSIPDSWISFVYVVEGEGIFGSLNSSPASAHNCLVLGPGDGLNVWNKSGKPLRFVLIGGQPLNEPVVQYGPFVMNTQAEIDQTIEDYHFCRNGFEKAKSWKSQSLG* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00308 299 CDD cupin_pirin_C 178 254 - -
Eupl07g00308 299 Gene3D Jelly Rolls 29 281 IPR014710 -
Eupl07g00308 299 CDD cupin_pirin_N 33 130 - -
Eupl07g00308 299 Pfam Pirin C-terminal cupin domain 181 285 IPR008778 -
Eupl07g00308 299 PIRSF Pirin 14 294 IPR012093 -
Eupl07g00308 299 Gene3D Jelly Rolls 150 255 IPR014710 -
Eupl07g00308 299 Pfam Pirin 35 128 IPR003829 -
Eupl07g00308 299 FunFam pirin 29 163 - -
Eupl07g00308 299 SUPERFAMILY RmlC-like cupins 16 295 IPR011051 -
Eupl07g00308 299 PANTHER PIRIN-RELATED 10 297 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00308 Eupl-Chr7 6975767 6978159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00308 15 292 Calmodulin-binding Proteins AT3G59220 65.714 1.39e-137 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00308 K06911 - nnu:104586293 535.413