Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00263 ATGATCATGGCTAAATTCTTCTTCTTTAGTGTTTTATTAGTTTCTGTGTTTCTACACTTCTTCTCAGTCACTGATGCAGCTCCTGAAGATGCACTCATCACACATCTTCCTGGTTTCAATGGCACTCTCCCTTCCAAACACTACTCTGGGTATGTGACCATAGATGAGAATCATGGGAAAAATCTCTTCTACTACTTTATTGTTTCGGAAAGGAACCCAACTAAGGACCCTGTTGTTTTGTGGCTCAATGGTGGACCAGGCTGCTCTAGCTTCGACGGCTTTGTGTATGAACATGGCCCATTCAATTTTCAAGCAGGAAAGACTCATGGAAGCCTTCCCCAACTGCAACTCAATCCACACAGCTGGTCCAAGGTTTCCAACATTATCTATTTAGATTCTCCTGTTGGTGTTGGATTGTCTTACTCCGAAAATAAAGATGACTATAATACTGGAGACCTAAAGACTGCCTCTGATACACACACATTTCTCCTCAAGTGGTTTGAACAATACCCAGAGTTCCTTTCTAACCCACTTTATATTTCTGGGGAGTCGTATGCTGGAGTATATGTGCCGACTCTTTCTTTTGAAGTGGTGAAAGGAATTGATGCTGGTGTAAAGCCCATTCTCAACTTCAAGGGTTACATGGTGGGAAATGGGGTCACTGACACAGTATTTGATGGCAATGCTCTTGTACCATTTGCACATGGGATGGGCCTGATCTCAGATGATCTGTTTCAGGAGGTTAATACCGCCTGTAAAGGAAGCTACTGGGATCCGATTAATGCAGGTTGCGAACAGAAGCTTGATAAAGTTGATGAGGACATTAGTGGTCTAAACATCTACGACATCCTTGAGCCCTGCTACCACAGCCCAGAATTAAGAGAGACTGCAACTGGTAGCAGCAGGTTACCATCTAGCTTCAGGCACTTAGGTGAGACTGATAGGCCTCTTTCAGTGAGGAAAAGGATGTTTGGCCGTGCTTGGCCTCTTAGAGCTCCAGTACGAGATGGAATTGTTCCAACATGGCCACAGCTCATGAATAGCAATAGTGTTCCATGCACCGATGATGAAGTTGCAACTTCATGGCTGAACAATGAAGCAGTAAGGAAAGCACTTCATGCCCAAGAGGAAAATATTACATGGGAGTTATGTACGGGCAAGATCTTTTACCATCATGATTCTGGAAGCATGATCACGTATCACAAGAACCTCACTGCCCGGGGTTATCGGGCACTTATATTCAGTGGTGATCATGATATGTGTGTGCCATATACCGGGAGTGAAGCATGGACTAGATCGCTTGGATATAAGATCGTGGATGAATGGAGGCCTTGGAATTCCGATGGGCAAGTTGCCGGGTACATACAAGGCTATGAGCACAACCTCACCTTTCTCACCGTAAAGGGATCCGGACATACTGTCCCTGAATACAAGCCGCGAGAGGCCTTGAACTTTTATAGCCGCTGGTTGGCGGGAGAACGAATATGA 1488 0.4503 MIMAKFFFFSVLLVSVFLHFFSVTDAAPEDALITHLPGFNGTLPSKHYSGYVTIDENHGKNLFYYFIVSERNPTKDPVVLWLNGGPGCSSFDGFVYEHGPFNFQAGKTHGSLPQLQLNPHSWSKVSNIIYLDSPVGVGLSYSENKDDYNTGDLKTASDTHTFLLKWFEQYPEFLSNPLYISGESYAGVYVPTLSFEVVKGIDAGVKPILNFKGYMVGNGVTDTVFDGNALVPFAHGMGLISDDLFQEVNTACKGSYWDPINAGCEQKLDKVDEDISGLNIYDILEPCYHSPELRETATGSSRLPSSFRHLGETDRPLSVRKRMFGRAWPLRAPVRDGIVPTWPQLMNSNSVPCTDDEVATSWLNNEAVRKALHAQEENITWELCTGKIFYHHDSGSMITYHKNLTARGYRALIFSGDHDMCVPYTGSEAWTRSLGYKIVDEWRPWNSDGQVAGYIQGYEHNLTFLTVKGSGHTVPEYKPREALNFYSRWLAGERI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00263 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Eupl07g00263 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Eupl07g00263 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Eupl07g00263 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Eupl07g00263 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Eupl07g00263 495 Gene3D alpha/beta hydrolase 25 322 IPR029058 -
Eupl07g00263 495 Pfam Serine carboxypeptidase 37 491 IPR001563 GO:0004185|GO:0006508
Eupl07g00263 495 FunFam Carboxypeptidase 397 492 - -
Eupl07g00263 495 FunFam Carboxypeptidase 26 310 - -
Eupl07g00263 495 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Eupl07g00263 495 Gene3D - 349 494 - -
Eupl07g00263 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 479 IPR001563 GO:0004185|GO:0006508
Eupl07g00263 495 FunFam Carboxypeptidase 352 494 - -
Eupl07g00263 495 SUPERFAMILY alpha/beta-Hydrolases 33 493 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00263 Eupl-Chr7 5798258 5811152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00263 358 493 Calmodulin-binding Proteins AT2G22960 47.445 4.73e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00263 K16296 - msin:131246437 828.55