Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00258 ATGCTCCTGACTTGCTCATATTACTGTTTATTTTATTTCCGTAAATGCAGTGGTACGCGGATTAAGACCCGCAAACGGAATATAGCAGCACCTCTGGACCCTGCAACATTTGCAGATGCAGTGGTCCAGATATACCTGGATAACGCTGGTGATCTGGAACTTGTTGCTAAGAGCATTGAATCTTCAGATCTTAACTTCTCAAGATATGGTGACACCTTTTTCGAGGTGGTCTTCACAGGAGGGCGTACTCAACCTGGCACAACAAAGTCTGATGAGGGGGAGCGCCACACCTATTCTGTTATAGATTGTGAGCCAAGACGTGAAGCTATTTTGCCATCTGTACTCTACATACAAAAGATCTTGCGCCGGAGGCCTTTCCTCATAAAGAATCTCGAAAATGTCATGCGTAGATTCCTGCAGTCGTTGGAGCTTTTTGAGGATAATGAGAGGAAGAAGCTTGCAATTTTCACAGCCCTTACATTCTCTCAGAAGCTATCGGGGCTTCCGCCGGAGACAGTTTTCCAGCCGCTGCTCAAAGATAATCTTGTGGGCAAGGGGCTAGTGCTTTCATTCATAACAGACTTCTTCAAGGAATATCTGATTGATAATAGCCTTGATGATCTGATTTCACTTCTGAAGCGGGGTAAAATGGAGGACAATCTCCTTGAATTCTTCCCCTCCGCAAAGCGCTCTGCTGAAGGTTTCTCTGAGCATTTCAGCAAGGAAGGGCTGGTTGCGTTGGTTGAATACAACGAGAAGAAGATATTTGAGGTCAAACTGAAGGAGATGAAATCTGCATTGACAACCCAAATTGCTGAGGAGACTGATATATCAGAAGTCATAGAAACTGTTAAGCAACGTGTTAAGGATGCAAAGTTACCCGATATTGAGATTGTGCGCATTTTGTGGGATGTTTTAATGGATGCTGTTCAGTGGTCAGGGAAAAATCAGCAGCAGAATGCTAATGCTGCACTGCGCCAGGTGAAAACATGGGCACAACTTTTAAATACCTTTTGTACCAATGGAAAGTTAGAGCTAGAACTCATGTACAAAGTTCAGATCCAATGCTATGAGGATGCCAAATTAATGAAGTTATTCCCAGAAATTGTGAGGTCTCTCTACGATCAGGATGTGCTTGCAGAAGATACCATTCTCCTCTGGTTCCGTAAGGGAACAAACCCGAAGGGCAGGCAAACCTTTGTTAAGGCTTTGGAGCCATTTGTGAATTGGCTGGAGGAAGCTGAAGAAGAAGAATAA 1257 0.4399 MLLTCSYYCLFYFRKCSGTRIKTRKRNIAAPLDPATFADAVVQIYLDNAGDLELVAKSIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKSDEGERHTYSVIDCEPRREAILPSVLYIQKILRRRPFLIKNLENVMRRFLQSLELFEDNERKKLAIFTALTFSQKLSGLPPETVFQPLLKDNLVGKGLVLSFITDFFKEYLIDNSLDDLISLLKRGKMEDNLLEFFPSAKRSAEGFSEHFSKEGLVALVEYNEKKIFEVKLKEMKSALTTQIAEETDISEVIETVKQRVKDAKLPDIEIVRILWDVLMDAVQWSGKNQQQNANAALRQVKTWAQLLNTFCTNGKLELELMYKVQIQCYEDAKLMKLFPEIVRSLYDQDVLAEDTILLWFRKGTNPKGRQTFVKALEPFVNWLEEAEEEE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00258 418 Gene3D - 260 414 - -
Eupl07g00258 418 SMART 542_3 332 417 IPR003307 GO:0005515
Eupl07g00258 418 FunFam ARM repeat superfamily protein 250 418 - -
Eupl07g00258 418 SUPERFAMILY ARM repeat 260 415 IPR016024 -
Eupl07g00258 418 ProSiteProfiles W2 domain profile. 253 418 IPR003307 GO:0005515
Eupl07g00258 418 Coils Coil 128 148 - -
Eupl07g00258 418 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 15 418 - -
Eupl07g00258 418 CDD W2_eIF5C_like 223 411 IPR043510 -
Eupl07g00258 418 Pfam eIF4-gamma/eIF5/eIF2-epsilon 345 418 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00258 Eupl-Chr7 5723531 5734853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00258 307 414 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 2.27e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00258 - - nnu:104586095 723.391