Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00254 ATGGCTCAGAAGAAAGGAGGTAGGGTTTCGGAAGACGCCGAGGAGCTGGCTCACGTTCCCTTGCAGGCCATACTCTTGGCCGATAGCTTCGCTCAGAAGTTTCGCCCCATCACTCTCGAGCGTCCTAAGGTACTCTTACCACTGGTTAACATCCCCATGATCGATTACACCTTGGCGTGGCTTGAATCTGCTGGTGTGGAAGAAGTTTTTGTCTTCTGCTGTGCTCACTCCAAGCAAGTCATTGATTATTTGGAGAATTCCCAGTGGCTTTCCCTACCAAAATTCTCCGTCGCCACCATCGAATCCCACGATTCCACGAGCGCCGGAGATGCCCTGCGCTTGATTTACGAGCGACATGTGATACACGGAGATTTTGTCCTTATAAGCGGAGATACTGTGAGCAATATGTCACTTACAGAAGCACTTCAAGAACACAAGGAGAGAAGGAAAAAAGATAGTAATGCTGTAATGACAATGGTGGTTAAGCAATCGAAGCTTTCTTTGTTGACTCACCAAACTCGACTCGGTAATGATGAACTGTTTATGGCAATTGATCCTGATACGAAGCAGCTTTTATATTATGAGGATAAGGCAGACCCCTTGAAAGGGATTATTTCTCTTGATAAGACATTGCTAGCTGATAATCCTGCTGTTTCTTTGCACAACGACAAGCAGGATTGTTACATCGATATCTGCTCCCCAGAAGTTCTTAGTCTTTTCACTGACAATTTTGACTATCAACATCTTCGGCGTCACTTTGTCAAAGGATTGCTTGTTGACGATATTATGGGGTATAAAATTTTCACTCATGAAATCCACTCAAGTTATGCGGCTCGAATAGATAATTTCAGAAGCTATGACACCATTAGTAAGGATATAATTCAAAGGTGGACATACCCTTTGGTGCCAGATGTTCAGTTTTTTGGAAATTGCCCAACTAAACTAGAAAGACAGGGGATGTACAAAGCATCAGAGATAGGGCAATCGCGTTCTGCACAAATCGGCCCTTTTACGTTGGTTGGAAAAGGGACGAATATTGGGGACCACTCTAAAATCTCCAATTCAGTTATTGGTGAAGGTTGCACTATTGGATCTAATGTTTCGATTGAAGGATCCTATGTTTGGAATAATGTCACCATTCAAGATGGCTGTAAGCTAAGGCATGCGATAGTATGTGATGGGGTGGTAATAAAGTCCGGAGTAGTTTTGGAACCTGGTGTGATTTTATCGTTCAAGGTCATAATTGGACAACAATTTGTTGTTCCTGCTTATTCAAAGGTATCTTTACTTCCCCAACCAACCAACCAAGACAGCGACGAGGAACTTGAGTATGCTGACAGTAGCAGTGGGATTGTGGAGCATCCATCCATGAGTAGTGCGCTGGATGTGCCGAATGGGGAGTTGGCATCCAAATCATCCGACACTTCTGAGGTTGGCATTTCAGGAGTCGGTTACATTTGGTCAGTTTGTGAAGGATTCCATGAAGAAGAATGGAGGCACTCAATTGCACCTATTCCTGCAGATAAACTTGTGGAGCTCACACATGCTGCACATGCTGAACTAGATTTACTGACTCAAGATGGCAGTATTCTCCCACCTTCTGGAGAGTTGAAACCTAACTCTGACACTGCTAATTCTGAAGATGATGATAATGAAGATTATAAAGATGATACTGTCTATTTTGAGAAAGAGGTGGAAGCAACTTTTCTAAGGGCTGTTCATGAAGGTGTGGAACAAGACCATGTGATCATTGAAGTGAATTCACTTCGGTTGTCCTACAATGTGCCATTTGCAGATTGTGCCGGAGCACTATTTTATTCATTGATGAAATTGGCGTTAGAAACTCCACATGATAGCAATATTGAACTGGCAAAAAATGCTGCGAGTGTAATTACGACGTGGGGAGGTCTTTTACGGCATTACCTACAGAGCATAGATGAGGAGATTGAAGTGATAATGAAATTTGAGGAAATGTGCTTGGAGTCTGCCAAAGAATTCTTTCCATTATTTGCTCAAATTTTGCACATCCTTTATGATAAAGAAATTTTATCAGAAGATGCTATTCTCTCATGGGCATCTGAGAAAGAAGGGGCAGACGAATCAGATAAAATCTTCGTTACACAATCAGAAGCATTCATTCAGTGGCTGAAAGAAGCATCTGAAGAAGAGGATTGA 2175 0.4253 MAQKKGGRVSEDAEELAHVPLQAILLADSFAQKFRPITLERPKVLLPLVNIPMIDYTLAWLESAGVEEVFVFCCAHSKQVIDYLENSQWLSLPKFSVATIESHDSTSAGDALRLIYERHVIHGDFVLISGDTVSNMSLTEALQEHKERRKKDSNAVMTMVVKQSKLSLLTHQTRLGNDELFMAIDPDTKQLLYYEDKADPLKGIISLDKTLLADNPAVSLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHEIHSSYAARIDNFRSYDTISKDIIQRWTYPLVPDVQFFGNCPTKLERQGMYKASEIGQSRSAQIGPFTLVGKGTNIGDHSKISNSVIGEGCTIGSNVSIEGSYVWNNVTIQDGCKLRHAIVCDGVVIKSGVVLEPGVILSFKVIIGQQFVVPAYSKVSLLPQPTNQDSDEELEYADSSSGIVEHPSMSSALDVPNGELASKSSDTSEVGISGVGYIWSVCEGFHEEEWRHSIAPIPADKLVELTHAAHAELDLLTQDGSILPPSGELKPNSDTANSEDDDNEDYKDDTVYFEKEVEATFLRAVHEGVEQDHVIIEVNSLRLSYNVPFADCAGALFYSLMKLALETPHDSNIELAKNAASVITTWGGLLRHYLQSIDEEIEVIMKFEEMCLESAKEFFPLFAQILHILYDKEILSEDAILSWASEKEGADESDKIFVTQSEAFIQWLKEASEEED* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00254 724 SUPERFAMILY ARM repeat 561 719 IPR016024 -
Eupl07g00254 724 SUPERFAMILY Nucleotide-diphospho-sugar transferases 19 367 IPR029044 -
Eupl07g00254 724 ProSiteProfiles W2 domain profile. 555 724 IPR003307 GO:0005515
Eupl07g00254 724 SMART 542_3 635 722 IPR003307 GO:0005515
Eupl07g00254 724 SUPERFAMILY Trimeric LpxA-like enzymes 266 427 IPR011004 -
Eupl07g00254 724 FunFam Trimeric LpxA-like enzyme 314 447 - -
Eupl07g00254 724 CDD LbH_eIF2B_epsilon 339 417 - -
Eupl07g00254 724 CDD W2_eIF2B_epsilon 561 724 IPR044123 GO:0005085|GO:0031369
Eupl07g00254 724 Pfam Nucleotidyl transferase 23 163 IPR005835 GO:0009058
Eupl07g00254 724 Gene3D Hexapeptide repeat proteins 316 427 - -
Eupl07g00254 724 FunFam Translation initiation factor eIF-2B epsilon subunit 551 724 - -
Eupl07g00254 724 FunFam Translation initiation factor eIF-2B subunit epsilon 10 301 - -
Eupl07g00254 724 MobiDBLite consensus disorder prediction 527 554 - -
Eupl07g00254 724 CDD eIF-2B_epsilon_N 21 237 IPR035543 -
Eupl07g00254 724 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 301 IPR029044 -
Eupl07g00254 724 Pfam eIF4-gamma/eIF5/eIF2-epsilon 647 724 IPR003307 GO:0005515
Eupl07g00254 724 Gene3D - 548 724 - -
Eupl07g00254 724 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 6 723 - -
Eupl07g00254 724 MobiDBLite consensus disorder prediction 432 457 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00254 2 720 Eukaryotic Initiation Factors Gene Family AT2G34970 66.713 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00254 K03240 - vvi:100248224 1169.07