Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00250 ATGGCAGAAAGGGAAGAGGACGATGGTGGGGCAATCGGTGACTGGAGAGCTCTAATTTCAAGCCCTGGAGGTATTTTGTTCCCGGGTTTTCTCTCTGAAGGGGTTGTTTCAAGATCGTTCTCTCAGCTTCTGAACGAGTCCGATGCTGCTCTGCCGACTGCCGATGGTGAGCAAGTTGACGATTTTTCGGTGAGTTCAGAGATAAAAGCCGAGGAAGGTGGTAGATTCGAACCTATGGATGTTTCTACGGATTGGAAGTCGCCACCAGCAGTTAGAAATGTGGGGAGTATTGCTGAGAGACGGGCTGCGAGGTGTGGATTCAATGCGCCAAGGATTAATACTGCTCGTTTTCGTTCCATGAGTCCGTTGTCGTCGCCGGCTGTTCGGTCGCCTTATCTTACGATACCTCCCGGTCTTAGTCCCACAACGTTGCTGGACTCCCCAGTCATGCTTTCAAATTCTCAGGCACAGCCATCTCCAACGACTGGAACTTTTTCATTGCCCCCTTTCAGCCACGAAAGTATGATGCCAACTTCTAATACCAATGAGGACAAGGACGAGGATGTTGATTCCTCATTCATGTTCAAGCCTCATGGGAATCCCTTTTCTTTGCAATGCCTTTATGGAACAGAAAATCAGGCTCAGAATCTGGGGATGACTAATGGCAACCATCAAGTTCTTGCTCCGGTGCAACCACAAGTGGATTTTGAGTGTCAAGCAGGGATTCCGAAACAAACAATGACAAAGAACTATGTCATCAGTTCTCCCTACAATATAGAAGTTGCCAACAGTATGATTGTGAATTCTAAGTGCAGTACTTTACAAACATCCCATTCTGGTGTTGCTAGTGATCAAGCACCTCAATATGAGGAACCGATGCACAGAGAGGATACAGGGTCACAGCAGCTTTTGGTGGGGAACCAGAAAGGGGCATATCCTACCACGGGGATAGGAAGACCATCAGAAGATGGATATAATTGGAGAAAGTATGGGCAGAAACAGGTAAAAGGTAGTGAGTATCCTCGGAGCTACTACAAATGCACTGATCCGAATTGTCAGGTGAAGAAAAAGATTGAACGTTCCCATGATGGTCAAATAACAGAAATTATTTATAAGGGTGCTCATAATCACCCAAAACCGCAGCCTAGTCGTCGATCAGCACTTGGATCAGCATTTGCGCTTAATGAAATGTCAGAGACAGGTGAGGGTTCTGGATCTTATGTCAAAGTTGAAGAAGGATCCGTTTGGAGAAGTATTCCCCAGGGATCTAAGGATAATAAAGTTAGTTCAGATTGGAGGGCTGATGGTTTGGAAAGGACATCATCTACATCTGTCGTAACTGAGCTTTCTGATCCATTATCAACTGCTCAAGGGAAACAATTGGGTATGCTTGAATCTGCAGATACTCCAGAGCTTTCATCTACACTTGCTAGTCATGATGAAGATGAAGATAGGGCAACACAGGGAAGCATATCACTTGATGATGATGATGCTAATGATGACGAGTCCGAGTCGAAAAGAAGGAAGAAAGAGAGCTGTTTGATTGAAACAAATTTGGCATCCAGAGCTGTCCGTGAACCAAGAGTTGTTGTCCAAACAGATAGTGAAGTGGACATACTTGATGATGGATACCGCTGGCGCAAATATGGGCAGAAAGTGGTTAAAGGAAATCCAAACCCTAGGAGCTACTACAAATGCACAAATGCTGGATGCTCTGTGAGGAAGCATGTTGAAAGAGCCTCACATGATTTGAAGTATGTGATTACGACCTATGAGGGAAAACACAACCATGAAGTACCTGCAGCGAGAAACGGTAGTCACTCGAACTCAACTGGTGGAAATGTACCTCCAGCTGCCCGACATGCTCAAACCACATTACCAGGAAGCACCAACATCGCAAAGCCTGAACCACAATTTCAAGATCTTGTACCTCATTTCGAGAGGAAACCTGAACTCGGTTGTGAATTCTTGAAACCCAGTAATCTAGGGGGTTTTGATAGTGATATAAAGTTAGGTGCTTCTGCTTGTTATGAGATGAAGCTTCCATCCTTGCAGAATGCCATGCCTTATGGCTCTTTCGGACTGAATGCTAGCCACAATGCAGCTCATCAAGCAGCTTCTATTGCTCAGGTTCCAGAATTCCCACTTGGATTGCCAATGAGCCTCCCCTTATCTGCAAACCTGACATTGAGCTCCAGCTTTGATTTTAACAATCATGGAAACTCTATTGGTCCTGCTCAGTCTTTTCTCGGGGGACATCAACCTAAGGAAGCTGATACGAGGTTCCTCAGGCCTAAACAGGAGCAGAAGGATGATGCTGTTTTTGAGACTCATCTTCCCATCAACCATCTTTCGAATGCATCATCATCAGTATATCGCCAGTTCATGGGAGGTTATCCATTGTAA 2406 0.453 MAEREEDDGGAIGDWRALISSPGGILFPGFLSEGVVSRSFSQLLNESDAALPTADGEQVDDFSVSSEIKAEEGGRFEPMDVSTDWKSPPAVRNVGSIAERRAARCGFNAPRINTARFRSMSPLSSPAVRSPYLTIPPGLSPTTLLDSPVMLSNSQAQPSPTTGTFSLPPFSHESMMPTSNTNEDKDEDVDSSFMFKPHGNPFSLQCLYGTENQAQNLGMTNGNHQVLAPVQPQVDFECQAGIPKQTMTKNYVISSPYNIEVANSMIVNSKCSTLQTSHSGVASDQAPQYEEPMHREDTGSQQLLVGNQKGAYPTTGIGRPSEDGYNWRKYGQKQVKGSEYPRSYYKCTDPNCQVKKKIERSHDGQITEIIYKGAHNHPKPQPSRRSALGSAFALNEMSETGEGSGSYVKVEEGSVWRSIPQGSKDNKVSSDWRADGLERTSSTSVVTELSDPLSTAQGKQLGMLESADTPELSSTLASHDEDEDRATQGSISLDDDDANDDESESKRRKKESCLIETNLASRAVREPRVVVQTDSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCSVRKHVERASHDLKYVITTYEGKHNHEVPAARNGSHSNSTGGNVPPAARHAQTTLPGSTNIAKPEPQFQDLVPHFERKPELGCEFLKPSNLGGFDSDIKLGASACYEMKLPSLQNAMPYGSFGLNASHNAAHQAASIAQVPEFPLGLPMSLPLSANLTLSSSFDFNNHGNSIGPAQSFLGGHQPKEADTRFLRPKQEQKDDAVFETHLPINHLSNASSSVYRQFMGGYPL* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00250 801 MobiDBLite consensus disorder prediction 475 491 - -
Eupl07g00250 801 FunFam WRKY transcription factor 312 381 - -
Eupl07g00250 801 MobiDBLite consensus disorder prediction 151 178 - -
Eupl07g00250 801 MobiDBLite consensus disorder prediction 598 635 - -
Eupl07g00250 801 Gene3D WRKY domain 311 381 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl07g00250 801 Gene3D WRKY domain 527 593 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl07g00250 801 ProSiteProfiles WRKY domain profile. 322 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g00250 801 SMART WRKY_cls 540 599 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g00250 801 SMART WRKY_cls 321 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g00250 801 FunFam WRKY transcription factor 33 527 593 - -
Eupl07g00250 801 MobiDBLite consensus disorder prediction 419 511 - -
Eupl07g00250 801 MobiDBLite consensus disorder prediction 602 635 - -
Eupl07g00250 801 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 145 618 IPR044810 GO:0003700
Eupl07g00250 801 SUPERFAMILY WRKY DNA-binding domain 533 600 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl07g00250 801 Pfam WRKY DNA -binding domain 541 598 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g00250 801 Pfam WRKY DNA -binding domain 322 378 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl07g00250 801 SUPERFAMILY WRKY DNA-binding domain 320 380 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl07g00250 801 MobiDBLite consensus disorder prediction 151 187 - -
Eupl07g00250 801 MobiDBLite consensus disorder prediction 435 474 - -
Eupl07g00250 801 ProSiteProfiles WRKY domain profile. 535 600 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00250 Eupl-Chr7 5483468 5500333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00250 95 603 WRKY Transcription Factor Family AT5G56270 45.455 3.56e-121 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl07g00250 WRKY 3.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00250 K18835 - ming:122068670 1080.86