Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00245 ATGAAGGTTGGTCTTCTACTCCGACTGTTCTTCTTCTCATGGGCATTAATGGCCTTACTGCAACGTTGCATGGGCAGCAACGACGTCCCTCTACAACTCAACGACGACGTCTTAGGCCTTATCGTCTTCAAATCAGAGCTTCACGACCCCTTTTCATCTCTCAGTTCCTGGAACGAAGATGACAACACCCCATGTTCTTGGAACTACGTACAATGCGATCCCATCTCTGGTCGAGTCTCCGAAGTCTCGCTGGATGGCTTGAACATATCAGGAAAAATCGGTCGAGGACTCGAGAAGTTGCAGAACTTGAAGGTTCTATCTCTCTCACGTAACAACTTCACTGGTAACATCAATCCCGAACTTTCACTCATTAGTAGTCTCAGAAGATTGAATCTAAGTCACAACAGTCTTTCTGGAAGAATTCCTATCGATCTTTGTAACATGACTTCAATCAGATTTCTTGATTTCTCAGACAATTCACTTTCTGGACCAGTTCCAGATAATCTGTTTGATAATTTCTTCTCTCTCAGATTCATTTCTTTGGCGAATAATCTCCTAGAAGGTCCAATTCCTACTTCACTGTATAAATGTGGTTTGTTGGGTGGTCTCAACTTTTCCAACAATCATTTTTCTGGTAACCCAGATTTTTTTAATGGTTTTTGGTTGCTAAAAAGGCTTAGAACCTTAGATCTTTCTCACAATGCATTATCTGGGGAAATCCCAGATGGGGTATCAGCTGTTCACAACTTGAAACTTCTCCAATTGCAGCAAAATCGCTTCTTCGGACTATTACCGACTGATATCGGACTGTGCCCGCACTTGATTCGATTGGATTTAAGCGATAATTTTTTCACTGGATCTTTGCCGGAGTCCTTGAACAGGCTTAATTCTCTGAAATTTTTCAGTTTATCGAATAACAAGTTAACTGGTGATTTCCCTCAGTGGATTGGTGACATGAGTAGTCTGGAGTACTTAGATTTTGCGAGCAATGACTTCACCGGAAACCTCCCCGTGTCATTGGGGGATCTGAAATTGCTGAATTATTTGAGTTTGTCCGATAACAGACTGACAGGAGAAGTCCCCTCTACAGTGGTTTACTGTACCAAGCTGTCCGCAATCCGGTTGAGGGGGAACAGTTTCAATGGGAGCATACCACAGGGTCTGTTTGATCTTGGATTGGAGGAAGTAGACCTTTCATGGAATGAATTCAGTGGTTCTATTCCACCTGGTTCAAGCCGATTGTTTGAGTCTATCCACGTATTGGATTTGTCGCGAAACAAGCTCACAGGGGCTATTCCTGCTGAGATGGGTCTATTCTCCAACTTAAGATACTTGAATTTATCTTGGAATAATGTCTTGTCGAGGTTGCCTCCGGAGCTCGGATATTTCGAGAATTTATCGGTGTTAGACCTTCGTAACACTGCTCTATACGGATTGATCCCGGAGGACTTATGTGAATCCAACAATCTGGCAATTCTGCAATTGGATGGAAATTCCTTGAGCGGTCGAATACCGGAAGAGATTGGAAATTGTTCATCCCTCTACTTGCTGAGCATGTCCCACAACAGCTTAAATGGTTCTATTCCGCCGGCCGTTTCAAGGCTAAAGAAGCTCAAGATTCTCAACTTGGAGTTCAACGAGTTAAGCGGCGAGATACCACAAGAGCTTGGTAAGTTAGAAAATCTTCTTGCAGTGAATATTTCCTACAACAAGCTGAGTGGCAGGCTACCTATGGGGGGTATATTTCAGAACCTAGACGAAAGCGCATTGCAGGGAAACTTGGGAATTTGCTCACCCTTGTTGAAGGGACCCTGTAAGATGAATGTCCCAAAGCCATTAGTCCTTGACCCAAATGCCTATAACAATCAAATGGGTGGTAATAATATAGGATCCCAATCCAATCATTCCGTAAATTTCCCACAACACCGAAGATTCCTGAGTATTTCTGCGATCATTGCGATATCCGCTAGTATCCTGATTGTTCTTGGAGTTGTAGTTGTGAGCCTACTAAATGTTTCTGCCCGAAGAAGGCTGGCGTTTGTCGACAATGTATTGGAAAGCATGTGCTCATCAAGCTCTCAGAGATCAGGCAGTCCTATAAGAGGGAAACTTGTTCTGTTCAATTCAAGATCGTCGGAAGATTGGATCCATAACGCCGAAAGTCTACTCAACAAGGCCTCTGAGATTGGAAAGGGAGTCTTTGGAACAGTGTACAAGGCTTCCATAGGAGGAGAGGGAAGGGTTGTAGCCATTAAGAAGCTAATTACATCCAATATAATCCAATATCCTGAAGATTTCGACAAAGAAGTTCGAATCTTAGGAAAAGCGCGGCACCCGAATCTGATGACACTCAAAGGGTACTACTGGACTCCTCAAATGCAACTTCTGATAACTGATTATGCTCCTAATGGGAGCTTACACTCCAAACTTCACCAAAGGTCCCCATCAACCCCTCCTCTGTCATGGGCCAACCGATTCAAGATTGCGCTTGGAACTGCAAAAGGACTTGCTCATCTGCACCAGTCTTTCCGTCCACCGATCATACACTACAACATGAAACCGAGTAACATCTTGCTTGATGAGGATTTTAACCCAAAGATCTCAGATTTTGGATTAGCAAGGCTTCTGACTAAGCTTGACAAGCACATAATAAGTAGCAGGTTTCAGGGTGCACTTGGTTACGTAGCACCGGAATTAGCTTGCCAAAGCCTAAGGATTAATGAGAAATGCGATGTCTATGGCTTCGGCGTAATGATCCTAGAGCTTGTAACAGGGAGAAGGCCAGTGGAGTATGGAGAAGATGATGTAGTGATACTGAGTGATCATGTAAGGGTGCTTCTTGAACAAGGGAATGTGTTGGATTGCGTCGATTCGAGCATGAATGGATATCCTGATGAGGAGGTCTTGCCGGTTCTTAAGTTGGGTCTAGTATGTACATCTCAGATACCTTCTAGCAGGCCATCAATGGCAGAAGTGGTGCAGATACTACAAGTTATCAAGACCCCAGTCCCACATAGGATGGAAGTATTCTAA 3033 0.4375 MKVGLLLRLFFFSWALMALLQRCMGSNDVPLQLNDDVLGLIVFKSELHDPFSSLSSWNEDDNTPCSWNYVQCDPISGRVSEVSLDGLNISGKIGRGLEKLQNLKVLSLSRNNFTGNINPELSLISSLRRLNLSHNSLSGRIPIDLCNMTSIRFLDFSDNSLSGPVPDNLFDNFFSLRFISLANNLLEGPIPTSLYKCGLLGGLNFSNNHFSGNPDFFNGFWLLKRLRTLDLSHNALSGEIPDGVSAVHNLKLLQLQQNRFFGLLPTDIGLCPHLIRLDLSDNFFTGSLPESLNRLNSLKFFSLSNNKLTGDFPQWIGDMSSLEYLDFASNDFTGNLPVSLGDLKLLNYLSLSDNRLTGEVPSTVVYCTKLSAIRLRGNSFNGSIPQGLFDLGLEEVDLSWNEFSGSIPPGSSRLFESIHVLDLSRNKLTGAIPAEMGLFSNLRYLNLSWNNVLSRLPPELGYFENLSVLDLRNTALYGLIPEDLCESNNLAILQLDGNSLSGRIPEEIGNCSSLYLLSMSHNSLNGSIPPAVSRLKKLKILNLEFNELSGEIPQELGKLENLLAVNISYNKLSGRLPMGGIFQNLDESALQGNLGICSPLLKGPCKMNVPKPLVLDPNAYNNQMGGNNIGSQSNHSVNFPQHRRFLSISAIIAISASILIVLGVVVVSLLNVSARRRLAFVDNVLESMCSSSSQRSGSPIRGKLVLFNSRSSEDWIHNAESLLNKASEIGKGVFGTVYKASIGGEGRVVAIKKLITSNIIQYPEDFDKEVRILGKARHPNLMTLKGYYWTPQMQLLITDYAPNGSLHSKLHQRSPSTPPLSWANRFKIALGTAKGLAHLHQSFRPPIIHYNMKPSNILLDEDFNPKISDFGLARLLTKLDKHIISSRFQGALGYVAPELACQSLRINEKCDVYGFGVMILELVTGRRPVEYGEDDVVILSDHVRVLLEQGNVLDCVDSSMNGYPDEEVLPVLKLGLVCTSQIPSSRPSMAEVVQILQVIKTPVPHRMEVF* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00245 1010 SUPERFAMILY L domain-like 46 404 - -
Eupl07g00245 1010 FunFam Inactive leucine-rich repeat receptor-like protein kinase 315 608 - -
Eupl07g00245 1010 Pfam Leucine Rich repeat 225 239 IPR001611 GO:0005515
Eupl07g00245 1010 CDD STKc_IRAK 729 997 - -
Eupl07g00245 1010 Pfam Protein kinase domain 725 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00245 1010 SUPERFAMILY L domain-like 313 588 - -
Eupl07g00245 1010 Pfam Leucine Rich Repeat 126 147 IPR001611 GO:0005515
Eupl07g00245 1010 Pfam Leucine Rich Repeat 441 459 IPR001611 GO:0005515
Eupl07g00245 1010 PANTHER RECEPTOR-LIKE PROTEIN 55 393 997 - -
Eupl07g00245 1010 Gene3D Ribonuclease Inhibitor 34 198 IPR032675 -
Eupl07g00245 1010 Gene3D Ribonuclease Inhibitor 199 333 IPR032675 -
Eupl07g00245 1010 Pfam Leucine rich repeat 302 356 IPR001611 GO:0005515
Eupl07g00245 1010 PRINTS Leucine-rich repeat signature 223 236 - -
Eupl07g00245 1010 PRINTS Leucine-rich repeat signature 127 140 - -
Eupl07g00245 1010 FunFam Inactive leucine-rich repeat receptor-like protein kinase 216 314 - -
Eupl07g00245 1010 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 717 800 - -
Eupl07g00245 1010 SMART LRR_typ_2 148 172 IPR003591 -
Eupl07g00245 1010 SMART LRR_typ_2 535 559 IPR003591 -
Eupl07g00245 1010 SMART LRR_typ_2 223 247 IPR003591 -
Eupl07g00245 1010 SMART LRR_typ_2 295 319 IPR003591 -
Eupl07g00245 1010 SMART LRR_typ_2 439 463 IPR003591 -
Eupl07g00245 1010 SMART LRR_typ_2 343 367 IPR003591 -
Eupl07g00245 1010 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 197 - -
Eupl07g00245 1010 Gene3D Ribonuclease Inhibitor 334 608 IPR032675 -
Eupl07g00245 1010 Gene3D Transferase(Phosphotransferase) domain 1 805 1006 - -
Eupl07g00245 1010 SMART serkin_6 723 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00245 1010 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 801 1005 - -
Eupl07g00245 1010 Gene3D Phosphorylase Kinase; domain 1 723 804 - -
Eupl07g00245 1010 ProSitePatterns Protein kinases ATP-binding region signature. 729 753 IPR017441 GO:0005524
Eupl07g00245 1010 SUPERFAMILY Protein kinase-like (PK-like) 710 1004 IPR011009 -
Eupl07g00245 1010 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Eupl07g00245 1010 ProSiteProfiles Protein kinase domain profile. 723 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00245 Eupl-Chr7 5400343 5403753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00245 11 1007 Receptor kinase-like Gene Family AT3G28040 62.388 0.0 1243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Eupl07g00245 Pkinase 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00245 - - nnu:104605298 1541.17