Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00244 ATGGGATTGATGGTTGAAGGAGAAGATGTTCTGCTTCCTCCTTGCAATTTCTCCATGGTTGAAAGAGGAATTTACAGATCTGGTTTTCCTAATTCCTCCAATTTTAGCTTCATTGAAACCCTAAATCTTCGATCGATCATATACTTGTGTCCTGAACCGTATCCTGTAGAGAACTCTGAATTTCTTCGATCTCAAAATATCCGGATTTTCCAGTTTGGGATTGAAGGCAACAAGGAGCCTTCTGTGTCAATTCCCAAGGATACTATCACGGAGGCTCTGAAAATCTTACTTGATGTCAGAAATCATCCAGTTCTGATCCATTGCAAACGCGGAAAGCACCGGACAGGTTCCCTTGTGGGTTGCTTGCGGAAATTGCAGAATTGGTGTTTGTCTTCTGTGTTTGAGGAGTACCACCGTTTTGCCGGTATCAAAGCCAGGGTAACCGATCTGAGATTCATTGAGATGTTCGACGTTTCCTGCCTCAAGCAGTGCCTTTATGGTATCATCTACAGGTACCAAGGGTACGCGTCCCACAACAGGCGCCTGGTTTATAAAGAAGAAAACTTGCACCAGAAGCGGATTACTTCCAGTTAG 594 0.4411 MGLMVEGEDVLLPPCNFSMVERGIYRSGFPNSSNFSFIETLNLRSIIYLCPEPYPVENSEFLRSQNIRIFQFGIEGNKEPSVSIPKDTITEALKILLDVRNHPVLIHCKRGKHRTGSLVGCLRKLQNWCLSSVFEEYHRFAGIKARVTDLRFIEMFDVSCLKQCLYGIIYRYQGYASHNRRLVYKEENLHQKRITSS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00244 197 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 157 IPR029021 -
Eupl07g00244 197 Pfam Tyrosine phosphatase family 11 162 IPR004861 -
Eupl07g00244 197 CDD PFA-DSP_Siw14 11 157 - -
Eupl07g00244 197 FunFam probable tyrosine-protein phosphatase At1g05000 10 160 - -
Eupl07g00244 197 PRINTS Plant and fungal dual specificity phosphatase signature 84 98 IPR020428 GO:0016791
Eupl07g00244 197 PRINTS Plant and fungal dual specificity phosphatase signature 67 81 IPR020428 GO:0016791
Eupl07g00244 197 PRINTS Plant and fungal dual specificity phosphatase signature 11 28 IPR020428 GO:0016791
Eupl07g00244 197 PRINTS Plant and fungal dual specificity phosphatase signature 48 61 IPR020428 GO:0016791
Eupl07g00244 197 Gene3D Protein tyrosine phosphatase superfamily 10 160 IPR029021 -
Eupl07g00244 197 ProSitePatterns Tyrosine specific protein phosphatases active site. 106 116 IPR016130 GO:0016311|GO:0016791
Eupl07g00244 197 ProSiteProfiles Dual specificity protein phosphatase domain profile. 16 165 IPR020422 GO:0006470|GO:0008138
Eupl07g00244 197 PANTHER TYROSINE-PROTEIN PHOSPHATASE 11 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00244 Eupl-Chr7 5380867 5385999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00244 1 197 Protein tyrosine phosphatase (PTP) family AT3G02800 62.189 2.03e-93 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00244 K18045 - ming:122070132 325.865