Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00224 ATGGGCGACCAACAACAACAACAACAACAACCGCCGTCGATTGATCTCCGAAACCTGAAAGCTTTGTCGGTTCTCGGTAGAGGAGCGAAAGGCGTTGTATTTCTTGTACGAAACGAAGAAGCATGTTCGTCCTCCAACAAAAACCTAGCTTTGAAGGCTATTTCTATAGCTTCGATCGAGAAGAAGAAGAAGAAGAATGTAAGCCATGAAGACGACAACAGAGACGTATTCAAACGGATCTGGTTCGAAAGAGATGTCTTGAAGTTGTTTTTTCACCCTCTACTCCCGAAACTTCGAGGATTTCTTGTTACTGAAGAAATCGTCGGTTTCGCCATTGATTACTGTCCTGGAGGAGATCTTAACTCTCTGCGCAAGCGTCAGACGGAAAAAATGTTCTCCGACGACATCATTAGGTTTTATGCGGCCGAATTAGTTCTCGCATTGGAGTATTTGCACGGATTGGGCATTATTTACCGAGATTTAAAGCCGGAAAACGTTTTGATTCAAGAAAATGGGCATCTCATGCTCGTTGATTTCGATCTCTCAACGAAACTCTCTTCGAAATCTGAGCAAACCCCTCAAATTCAGCCGACGAGATCTTATTCCCGATCTCGATCTCAAAATCACCATCCTAATACTGTCTCCTCCGACAAGAAAAAGAAAAAGCGCTCACCGACGTTCTGCTTCTGCAATTCAGGCATCTCGCCTGTCGACTCGGTATCTCCGCCTGAAATCAGAGTCGACTCGGAAAGATCTGACTCAGCATCCACAGAGAAGTCGAACTCGTTCGTGGGAACGGAGGAGTACGTGGCTCCTGAGATCATCTTAGGGAACGGTCACGATTTCTCTGTGGACTCGTGGGGCCTTGGCGTTGTACTTTACGAGATGCTGTACGGACGGACGCCGTTCCGAGGGACTAATCGGAGAGAGACGTTTCAACGGATTCTGACGAATCAGCCGGAGTTAGTCGGGGAAAAGACGCCTCTGAGGGATCTGATTGGGAAACTTCTGGAAAAAGACCCTGCGGAACGAATCTCCTTAGATGAAATCAAAGGTCACGATTTCTTTACAGGGGTAGATTGGGATTCGATATTTCAAATCTCGAGGCCACCTTTTATTCCACCTCCCGTGCTAAGTGACGAGGAGGTGGACATGGAGGGAATTAACGGAATTGACGTAGAGTTATTCGTCCAAGGGCTTTTCAATAGTGATGACGTGGAAAAGGAAAGATATACTGTTAATAATAATAACAAGAAAAATAGTAATGAGGCTGTTTGGGTGGAGGGTTATAACAATCCTTCAAAAACGGCCGATTTTTTGAATATTTTCTGA 1332 0.4535 MGDQQQQQQQPPSIDLRNLKALSVLGRGAKGVVFLVRNEEACSSSNKNLALKAISIASIEKKKKKNVSHEDDNRDVFKRIWFERDVLKLFFHPLLPKLRGFLVTEEIVGFAIDYCPGGDLNSLRKRQTEKMFSDDIIRFYAAELVLALEYLHGLGIIYRDLKPENVLIQENGHLMLVDFDLSTKLSSKSEQTPQIQPTRSYSRSRSQNHHPNTVSSDKKKKKRSPTFCFCNSGISPVDSVSPPEIRVDSERSDSASTEKSNSFVGTEEYVAPEIILGNGHDFSVDSWGLGVVLYEMLYGRTPFRGTNRRETFQRILTNQPELVGEKTPLRDLIGKLLEKDPAERISLDEIKGHDFFTGVDWDSIFQISRPPFIPPPVLSDEEVDMEGINGIDVELFVQGLFNSDDVEKERYTVNNNNKKNSNEAVWVEGYNNPSKTADFLNIF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00224 443 SMART serkin_6 19 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00224 443 MobiDBLite consensus disorder prediction 187 211 - -
Eupl07g00224 443 MobiDBLite consensus disorder prediction 240 260 - -
Eupl07g00224 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Eupl07g00224 443 Pfam Protein kinase domain 256 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00224 443 Pfam Protein kinase domain 22 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00224 443 PANTHER FLIPPASE KINASE 1-RELATED 8 378 - -
Eupl07g00224 443 Gene3D Transferase(Phosphotransferase) domain 1 256 376 - -
Eupl07g00224 443 SUPERFAMILY Protein kinase-like (PK-like) 18 385 IPR011009 -
Eupl07g00224 443 Gene3D Phosphorylase Kinase; domain 1 20 118 - -
Eupl07g00224 443 MobiDBLite consensus disorder prediction 187 224 - -
Eupl07g00224 443 ProSiteProfiles AGC-kinase C-terminal domain profile. 357 423 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl07g00224 443 FunFam Serine/threonine-protein kinase OXI1 119 187 - -
Eupl07g00224 443 ProSiteProfiles Protein kinase domain profile. 19 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00224 443 Gene3D Transferase(Phosphotransferase) domain 1 119 201 - -
Eupl07g00224 443 FunFam Serine/threonine-protein kinase OXI1 258 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00224 Eupl-Chr7 4913099 4915021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00224 2 432 AGC Kinase Gene Family AT3G25250 53.741 2.29e-148 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl07g00224 Pkinase 1.1e-29 CL0016