Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00221 ATGGCCTCCATGAATAACTGGTTGGCTTTCTCTCTTTCTCCTCAAGAACTTCCTTCACAAACTCAAAGCCATGGTCCACCAACTGTTTCTCGTATGGGATTTAACTCAGATGAAGTCTCCGGCACTGATGTCTCCGGTGATTGCTTTGATCTAACTTCTGACTCAACTGCTTTAAGACCTGACGGTCCTTTTGGTATCTTGGAAGCCCTCAACAGAGCCCATCATCAACCACATGATTGGAACGTGAAGGATTTGGGTATGAACTGCGATACCAACTTCAAAACAAGTTCAGAGCTTTCGATGCTTATTGGTGGTTCCAGCACTAACCAGAACCTAGACCATGAGGAGCCGAAGCTTGAAGATTTTCTTGGCGGGCACTCCTTTTCTGATCACGAACAGAAACTTCACGGGTGCAACGCGATTACCGCGGCTTATGATACCAGCGGAGACTACATGTTTTCAAATTGTTCGTTACAGCTTCCAGCAGCGACAGCAACAGCAACAGTGACATCATCAAATGGTGGTGGATGCAGCACTGGTGGAAGTGTTAACAACAACTCAATCGGGTTGTCGATGATCAAGACGTGGTTGAGGAACCAGCCAGCCCCTACACAGCCGGAGAACAAGAATGATGGAGGGCCCACCATGGCAAACGGTGGGGTCTTGACGAATGCGCAGACGTTGTCTCTATCCATGAGCACGGGATCACAATCTAGTTCTCCTTTGCCGATTCTAACGGCGGCTGCGGGCGTAAGTGGAGGAGAGAGTTCTTCGTCGGAGAATAAGCAGAAAACTACAGCTCTTGATAGCCAAAGTGGTGCTATAGAGGCAGTTCCCCGGAAGTCCATTGATACATTTGGGCAGAGGACTTCCATTTACCGTGGTGTCACAAGGCACAGATGGACTGGTAGATATGAAGCTCATCTTTGGGACAACAGCTGCAGAAGAGAAGGGCAGACTCGTAAGGGAAGGCAAGGTGGTTATGACAAAGAAGAAAAAGCAGCTAGAGCTTATGATTTGGCTGCCTTGAAGTACTGGGGCTCAACCACCACAACAAACTTCCCTATTAGTAATTATGAGAAAGAGTTGGAGGAGATGAAGCACATGACCAGGCAGGAGTATGTTGCATCTCTTAGAAGGAAAAGCAGTGGGTTTTCTCGGGGAGCATCTATTTACCGTGGAGTGACGAGGCACCATCAGCATGGAAGATGGCAAGCTAGGATTGGAAGGGTCGCAGGGAACAAAGATCTATACTTGGGCACTTTCAGCACCCAAGAAGAAGCAGCTGAAGCCTACGACATTGCTGCAATAAAATTCCGTGGCCTGAATGCAGTAACAAACTTTGATATGAGCAGATATGATGTAAATAGCATAATTGAGAGCAGCACTTTACCAATAGGGGGAGCCGCAAAGCGTTTAAAAGAAGCCGAGCAGACTGAAACAATCATGGATGGACGGAGGACAGATGATCATGACAACATAACTTCACAGTTAACTGATGGAATCAACAACTATGGTGTCCACCATCATGGGTGGCCCACTATCGCATTCCAACAAGCTCAGCCATTAAGCATGCACTACCCATACAGTCAGCAAAGAGGTTGGTGTAAGCAAGAACAAGAAGCAGTTGCTGCCCACAGCTATCAAGATCTTCATCAACTACAATTGGGCAATACCCACAACTTTTTTCAGCCTTCTGTGCTGCACAACCTCATGAGCTTAGACTCCTCATCTTTGGAACATAGCTCTGGGTCTAATTCTGTTATCTACAGCAGTGGAGGAGGTGGAAGCGGAAGTGGAGGGAGCAATGGCAACTTTCAAGGAGTAGTGGGTGGAAATAACACTGGCTTTGTTATGCCTATGGGTTCAGTGATTTCTGATCAAAGCAACCATAATCAAGGAAGTAGTTTTGGAGAGAATGAAGTGAAACCATTGGGTTATGAGAACATTTTAGCCTCGACGGATCCTTATCAAGGTAGGAATATGTATTATCTGTCGCAGCAGTCACCACCAGGTATGAAGACTGATGGGTATGATCAGGGCTCTGCTTGTAACAATTGGATGCCGACGCCAGTTCAGGCGCTTGCGCCAAGGTCGAGCAATCTTGCGGTTTGCCATGGAGCTCCAATTTTCACAGTATGGAATGATACATAG 2154 0.4694 MASMNNWLAFSLSPQELPSQTQSHGPPTVSRMGFNSDEVSGTDVSGDCFDLTSDSTALRPDGPFGILEALNRAHHQPHDWNVKDLGMNCDTNFKTSSELSMLIGGSSTNQNLDHEEPKLEDFLGGHSFSDHEQKLHGCNAITAAYDTSGDYMFSNCSLQLPAATATATVTSSNGGGCSTGGSVNNNSIGLSMIKTWLRNQPAPTQPENKNDGGPTMANGGVLTNAQTLSLSMSTGSQSSSPLPILTAAAGVSGGESSSSENKQKTTALDSQSGAIEAVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEEKAARAYDLAALKYWGSTTTTNFPISNYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVNSIIESSTLPIGGAAKRLKEAEQTETIMDGRRTDDHDNITSQLTDGINNYGVHHHGWPTIAFQQAQPLSMHYPYSQQRGWCKQEQEAVAAHSYQDLHQLQLGNTHNFFQPSVLHNLMSLDSSSLEHSSGSNSVIYSSGGGGSGSGGSNGNFQGVVGGNNTGFVMPMGSVISDQSNHNQGSSFGENEVKPLGYENILASTDPYQGRNMYYLSQQSPPGMKTDGYDQGSACNNWMPTPVQALAPRSSNLAVCHGAPIFTVWNDT* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00221 717 MobiDBLite consensus disorder prediction 249 272 - -
Eupl07g00221 717 Pfam AP2 domain 391 441 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 Pfam AP2 domain 292 347 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 ProSiteProfiles AP2/ERF domain profile. 292 355 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 PRINTS Ethylene responsive element binding protein signature 293 304 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 PRINTS Ethylene responsive element binding protein signature 431 451 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 SMART rav1_2 391 455 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 SMART rav1_2 292 361 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 SUPERFAMILY DNA-binding domain 390 451 IPR016177 GO:0003677
Eupl07g00221 717 FunFam AP2-like ethylene-responsive transcription factor ANT 291 357 - -
Eupl07g00221 717 ProSiteProfiles AP2/ERF domain profile. 391 449 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 FunFam AP2-like ethylene-responsive transcription factor 390 451 - -
Eupl07g00221 717 SUPERFAMILY DNA-binding domain 291 357 IPR016177 GO:0003677
Eupl07g00221 717 Gene3D AP2/ERF domain 292 357 IPR036955 GO:0003700|GO:0006355
Eupl07g00221 717 Gene3D AP2/ERF domain 391 451 IPR036955 GO:0003700|GO:0006355
Eupl07g00221 717 CDD AP2 390 451 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 CDD AP2 291 357 IPR001471 GO:0003700|GO:0006355
Eupl07g00221 717 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 110 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00221 Eupl-Chr7 4849281 4852841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00221 187 717 AP2-EREBP Transcription Factor Family AT5G17430 46.920 1.01e-133 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Eupl07g00221 AP2 3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00221 K09285 - nnu:104586090 1060.44