Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00207 ATGCGTCGGTGGCTCTGTTGTAAATGTCAAGTAGAAGAATCATACAATCCAAATGAAGATGAACCCCTGAAAAGCCCGAGGAACCATGCAGATGGGAACCTAAAAGTCTCAAAGCATTCCCCCCCAGTCAAGACTGAAGTGCAGAAAGCACCACCACCTATTGAAGTGTCTGCATTGCCTTTAGATGAGCTGAAAGAAAAGACTGACAATTTTGGGTCGAAGTCTTTGATTGGTGAAGGGTCATATGGAAGGGTATATTATGCAACCTTAAACAGTGGAAAAGCTGTGGCCATAAAGAAGCTTGATGTTGCATCTGAACCGGAGTCCAATGTTGAATTTTTGACCCAGGTTTCCATGGTGTCAAGACTGAAGCATGAAAATCTTGTCGAGTTGCTTGGTTACTGCGTGGAAGGAAATCTTCGTGTGTTAGTATATGAGTTTGCAACCATGGGTTCTCTACATGACATTTTGCACGGTAGAAAAGGAGTCCAAGGTGCACAGCCAGGTCCTGTGCTTGACTGGATGCAGCGAGTGAGAATTGCTGTTGATGCAGCAAGGGGATTGGAGTATTTGCATGAGAAGGTTCAACCCACTATAATACACAGAGATATCAGATCAAGTAACGTGCTCTTATTTGAAGACTTCAAAGCCAAAATTGCAGACTTCAACCTTTCAAATCAAGCTCCTGACATGGCTGCTCGTCTTCATTCTACTCGAGTTTTGGGAACCTTTGGCTATCATGCACCAGAGTATGCAATGACTGGTCAATTGACGCAAAAGAGCGATGTATATAGCTTTGGTGTCGTTCTTCTGGAGCTTTTGACTGGTAGGAAACCTGTTGATCATACAATGCCTCGTGGGCAGCAGAGTCTCGTCACTTGGGCAACTCCAAGATTGAGTGAGGATAAGGTTAAACAATGTGTAGATCCAAGGCTAAAGGGAGAGTATCCTCCAAAAGGAGTTGCTAAGCTGGCTGCTGTGGCAGCATTATGTGTGCAGTATGAATCTGAATTCCGCCCAAACATGAGTATCGTTGTCAAGGCGCTCCAACCACTTCTCACGCAGAAGTTTCCTGCTCCAGCTCCAGCTCCAGCTCCTGAGATTTAG 1107 0.4508 MRRWLCCKCQVEESYNPNEDEPLKSPRNHADGNLKVSKHSPPVKTEVQKAPPPIEVSALPLDELKEKTDNFGSKSLIGEGSYGRVYYATLNSGKAVAIKKLDVASEPESNVEFLTQVSMVSRLKHENLVELLGYCVEGNLRVLVYEFATMGSLHDILHGRKGVQGAQPGPVLDWMQRVRIAVDAARGLEYLHEKVQPTIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPRLKGEYPPKGVAKLAAVAALCVQYESEFRPNMSIVVKALQPLLTQKFPAPAPAPAPEI* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00207 368 CDD STKc_IRAK 77 352 - -
Eupl07g00207 368 Pfam Protein tyrosine and serine/threonine kinase 75 349 IPR001245 GO:0004672|GO:0006468
Eupl07g00207 368 Gene3D Transferase(Phosphotransferase) domain 1 149 358 - -
Eupl07g00207 368 FunFam PTI1-like tyrosine-protein kinase 3 33 147 - -
Eupl07g00207 368 SUPERFAMILY Protein kinase-like (PK-like) 50 349 IPR011009 -
Eupl07g00207 368 MobiDBLite consensus disorder prediction 15 34 - -
Eupl07g00207 368 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Eupl07g00207 368 Gene3D Phosphorylase Kinase; domain 1 34 147 - -
Eupl07g00207 368 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Eupl07g00207 368 FunFam PTI1-like tyrosine-protein kinase 3 149 360 - -
Eupl07g00207 368 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 358 - -
Eupl07g00207 368 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00207 368 MobiDBLite consensus disorder prediction 15 50 - -
Eupl07g00207 368 SMART tyrkin_6 71 349 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00207 Eupl-Chr7 4492501 4503538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00207 5 350 Receptor kinase-like Gene Family AT4G02010 46.418 6.77e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Eupl07g00207 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00207 K13436 - mof:131150424 646.736