Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00171 ATGGGACATAGCTCTAAGAAGAAACGAGGTGGTGGTGTTGCGAGTGGCCGGAAGAGTAAGGGCAGGGCTCCTTCGAAGGACCATGCTTCTCATGCCGGCGATGATGGCGATATCCTCTCCGAGGAGCTCACTGCCCTATGTGCGATATTTCAAGAAGATTTCAAAATTGTTTCAGAGTCACCTCCTCAATTCATTATAAATATCAGGCCTTACTCAAAAGATATAGGCTCTGAGGATCTCGATGTCTCGGTTCTTGTTTCAATAAGATGCTTGCCGGGGTATCCTTACAAGTGCCCAAAGTTGCAAATAATACAAAAGGAAGGTTTATCAAAAGATGATGCAGATAATCTTTTGTCTTTGCTTCATGATCAGGCAAATTTTAATGCTCGAGAAGGACGTGTAATGATTTTCAATCTGGTGGAAGCTGCTCAAGAGTTTCTATCTGAAATTGTTCCAGTTGGCCAACCAGACGAATCTGTTTTATGTCCGAGAGTGGATAGAAGGGATCAGTGGCTTCATGGGGATGTGGCAATTGCCTGTGACAAGATTCACTCTTCTATTTCTAGGGGACCTTTTGTTTATGGTTTGGTCGATCTCGTTATAGGTTATGAAGATCTATGGGGTTGGGGCCTTGGAACTGACAAAAACGGAGACAGAAGTTCTTCAATACATGCCCATACATGGGACGTTTCGAACATTGGACATAGGGTTCCAGAAAAGCAATTTTTTCTGAATGCAAAACCAGTAGAATTACAAAATACGAAGCAAGGTCCAATACCACAGCCTATTAGCAAATTAGATCCTCTTAAAGAAGAAAGTGAAGATGACAGCAAGAGCATATTTCCTAGCAGTTCTAGTAGATCAATGGTCGAGGAATTGTCGATAAATGGTTCGATTCACGAGGATCAAGAGTTAAAGGAGCTTATCCTCGGGGAGCAAATAGCGAAGGTCGATGATTGTGATCTTGAAGGCAAGCCTTCTGGTTCTCTATTTTCTACTTCTGTGGTACATGATCAAGCATCTGAGACTGTGGAAAAAGATCTAATTATGGTTCATCTGCTTCGCCTTGCTTGCGCTTCTAAAGGACCATTGGCTGATGCTCTGCCAGAAATAACATCAGAGCTGTTCAATCTGGGGATTTTTTCAGAACGTGTGCGAGATTTGGCTACTAAACCGCCTTTGCTTTTTGACAAAGCCTTTGATCATGTTTTTCGGCAGCATATGGTTTCATCTTCAAACTCTCAATTTTGGAAGGGCACTTCTGATTTTGGAGCACATAATACTTCATCTCTTCCAAGTTCTCGATATCTCAATGACTTTGAGGAGCTTTGTTCACTTGGTCATGGTGGTTTTGGTCATGTCGTGTTGTGCAAAAATAAACTAGATGGGAGGCACTATGCTGTGAAGAAGATTCGCCTCAAGGACAAAAGTCCACCGCTTAATGATAGAATATTGAGGGAGGTAGCCACACTTTCCCGTTTGCAGCATCAACATGTTGTTCGATACTATCAGGCATGGTTTGAAACAGAAGTTGGTGGTGGTCATGGTGACCTCACATGGGGTTCTAGGAGTGCTGGCAGCTCCAGTTGCAGCTACATGGGGGCAAGTTCAACAAATGCCATTGGGCCTGAGAATAAGCTAGAATCAACATACATATACATACAGATGGAGTACTGCCCTCGGACTCTACGTCAGATTTTTGAATCATACAGTAGTCTCTTTGAAAAGGAATTTGCGTGGCATTTGTTTCGCCAAATTGTAGAGGGCATAGCACACATACATGCTCAAGGAATCATCCATCGCGACTTGACACCGAATAACATCTTCTTCGATGCTCGTGATGATATTAAAATTGGTGATTTTGGTCTTGCTAAATTCTTGAAATTGGAGCAGCTGGATCATGATCCACTTTTTCCTACGGAGACAAATGGAGTTTCAGTGGATGGAACTGGTCAAGTGGGCACCTATTTTTACACAGCACCAGAAATTGAGCAAGGGTGGCCAAAGATTGATGAAAAGGCTGACATGTACAGCTTAGGAATTGTATTCTTTGAGTTATGGCACCCTTTCGAAACACAAATGGAAAGGCAAATTGTTCTTTCAGATCTGAAACAAAAAGGAGCGCCTCCTCCTTCTTGGGTTGATGAATATCCGGAACAGGCAGCCATATTGCGGTGCTTAATGTCTCCAAGTCCATCTGATCGTCCATCCGCCAAAGAACTTCTCCAAAATGCATTGCCTCCACGAATGGAAGATGAGTGGTTAAATGATATTCTACGAGCAATACAGTCTCCAGAGGACACACGCGTTTATGAAAAAGTTGTATTAAAAATTTTTGATGAGGAGAGGTTAATCATGAAAGCCCACCGTCAACATGGTGTAAGATCGAAGTTGGCCAAAGATGAATCTTCCTTTATCCAAGAGTTTGATGCAGAAAACCGTGATGTTATTATTGAGGTAGCAAAGGAAGTGTTCAGGCAGCATTGTGCAAAGAGGATTGATATAAAACCAATGCATTTATTGGATGATTATCAGCAGTTCAATAGGGATGCTGTTAAACTTTTGACCCATGAAGGAGACATGCTTGAGCTTTGTTATGAGCTGCGTATGCCCTTTGTTAATTGGGTTATTGCAAACCAGAAATCGTCATTCAAAAGATATGAAATATCTTGGGTTTATAGGAGAGCAATTGGTCACTCAACCCCAAATCGTTATCTTCAGGGTGATTTTGACATTATTGGTGGTGCATCAGCATTAACAGAGGCAGAGGTTATTAAGGTGGTAATGGATATTATAACTCAATTTTTTCATTTGGGTTCGTGTCATATTCGTTTAAATCATGCCAACCTACTGGATGCGATTTGGTCTTGGGTAGGAATTGAGGCTGAGCTTAGAGAAAGTGTAGCACAGTGTCTCTCTGCAATAGGTTCTCTGTGTCCTCAGTCTTCGAAACGCAAGGAAAAATGGGTTTTCATTCGGAAACAACTTTTGGAGGATCTTAATCTAGCAGAAGTTGTTGTCAACAGATTACAAACAGTAGATTTAAGGTTTTGTGGAGTTGCAGATCAAGCCCTTCCTAGATTGATGGGAGCCCTTCCTCGTGATAAACATACCCGCAAGGCACTTGAGGATTTGTCAACCCTCTTTAGCTACTTAAGAGTTTGGAGGATTGAGAAAAATGTTTTTATAGATGCCCTTATGCCACCTACGGAGAGTTATCACCGGGAACTATTTTTTCAGATATTTAGTGAGAAAATTTTGCTTGCTGTTGGTGGTCGCTATGATCATCTACTCCATCAAATGTGGAACCATGAATGTAAATCAAACCCGCCAGGCGCTGTTGGGACCAGCCTTGCATTGGAGACTATTCTTCCTCATCCTTCCGTAGAGATCAAACCTTCCAGAAATGAAGCTAGCATTCATGTTCTTATCTGTTCAAGAGGTGGAGGTGGTTTGCTAGAAGAGCGCATGGAGATAGTTGCTGAGCTATGGGAGGCGAATATCAAAGCTGAATTTGTCCCCATGTCAGACCCAAGCCTCACAGAGCAGTATGAATATGCAAATGAGCATGATATCAAATGCCTCGTCATCATAACTGAAACTGGTCTGTCTCAAACAAGCTCTGTTAAGGTCCGACATATTGAACTTAAGAAGGAGAAGGAAGTTGAGAGAGGAGGCCTTGTAAAGTTTCTAATGGATGCAACAGCAACACAGTTCAGGAACCTCTCTATTTGGAATTGA 3741 0.4213 MGHSSKKKRGGGVASGRKSKGRAPSKDHASHAGDDGDILSEELTALCAIFQEDFKIVSESPPQFIINIRPYSKDIGSEDLDVSVLVSIRCLPGYPYKCPKLQIIQKEGLSKDDADNLLSLLHDQANFNAREGRVMIFNLVEAAQEFLSEIVPVGQPDESVLCPRVDRRDQWLHGDVAIACDKIHSSISRGPFVYGLVDLVIGYEDLWGWGLGTDKNGDRSSSIHAHTWDVSNIGHRVPEKQFFLNAKPVELQNTKQGPIPQPISKLDPLKEESEDDSKSIFPSSSSRSMVEELSINGSIHEDQELKELILGEQIAKVDDCDLEGKPSGSLFSTSVVHDQASETVEKDLIMVHLLRLACASKGPLADALPEITSELFNLGIFSERVRDLATKPPLLFDKAFDHVFRQHMVSSSNSQFWKGTSDFGAHNTSSLPSSRYLNDFEELCSLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSPPLNDRILREVATLSRLQHQHVVRYYQAWFETEVGGGHGDLTWGSRSAGSSSCSYMGASSTNAIGPENKLESTYIYIQMEYCPRTLRQIFESYSSLFEKEFAWHLFRQIVEGIAHIHAQGIIHRDLTPNNIFFDARDDIKIGDFGLAKFLKLEQLDHDPLFPTETNGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFETQMERQIVLSDLKQKGAPPPSWVDEYPEQAAILRCLMSPSPSDRPSAKELLQNALPPRMEDEWLNDILRAIQSPEDTRVYEKVVLKIFDEERLIMKAHRQHGVRSKLAKDESSFIQEFDAENRDVIIEVAKEVFRQHCAKRIDIKPMHLLDDYQQFNRDAVKLLTHEGDMLELCYELRMPFVNWVIANQKSSFKRYEISWVYRRAIGHSTPNRYLQGDFDIIGGASALTEAEVIKVVMDIITQFFHLGSCHIRLNHANLLDAIWSWVGIEAELRESVAQCLSAIGSLCPQSSKRKEKWVFIRKQLLEDLNLAEVVVNRLQTVDLRFCGVADQALPRLMGALPRDKHTRKALEDLSTLFSYLRVWRIEKNVFIDALMPPTESYHRELFFQIFSEKILLAVGGRYDHLLHQMWNHECKSNPPGAVGTSLALETILPHPSVEIKPSRNEASIHVLICSRGGGGLLEERMEIVAELWEANIKAEFVPMSDPSLTEQYEYANEHDIKCLVIITETGLSQTSSVKVRHIELKKEKEVERGGLVKFLMDATATQFRNLSIWN* 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00171 1246 MobiDBLite consensus disorder prediction 1 15 - -
Eupl07g00171 1246 ProSiteProfiles RWD domain profile. 41 150 IPR006575 GO:0005515
Eupl07g00171 1246 SMART RWD2001b 41 150 IPR006575 GO:0005515
Eupl07g00171 1246 SUPERFAMILY Protein kinase-like (PK-like) 436 746 IPR011009 -
Eupl07g00171 1246 FunFam eIF-2-alpha kinase GCN2 30 155 - -
Eupl07g00171 1246 Pfam Anticodon binding domain of tRNAs 1141 1237 IPR024435 -
Eupl07g00171 1246 FunFam Histidine--tRNA ligase, cytoplasmic 1137 1236 - -
Eupl07g00171 1246 CDD STKc_EIF2AK4_GCN2_rpt2 433 743 - -
Eupl07g00171 1246 Gene3D Ubiquitin Conjugating Enzyme 29 155 IPR016135 -
Eupl07g00171 1246 Pfam Protein kinase domain 441 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00171 1246 Pfam RWD domain 39 147 IPR006575 GO:0005515
Eupl07g00171 1246 MobiDBLite consensus disorder prediction 20 35 - -
Eupl07g00171 1246 ProSiteProfiles Protein kinase domain profile. 440 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00171 1246 Gene3D Bira Bifunctional Protein; Domain 2 800 1130 IPR045864 -
Eupl07g00171 1246 SUPERFAMILY Class II aaRS ABD-related 1139 1236 - -
Eupl07g00171 1246 SUPERFAMILY Class II aaRS and biotin synthetases 810 1125 IPR045864 -
Eupl07g00171 1246 SUPERFAMILY UBC-like 37 147 IPR016135 -
Eupl07g00171 1246 Pfam Histidyl-tRNA synthetase 904 1123 IPR041715 -
Eupl07g00171 1246 FunFam eIF-2-alpha kinase GCN2 428 558 - -
Eupl07g00171 1246 Gene3D Phosphorylase Kinase; domain 1 428 558 - -
Eupl07g00171 1246 FunFam eIF-2-alpha kinase GCN2 562 756 - -
Eupl07g00171 1246 ProSitePatterns Protein kinases ATP-binding region signature. 446 470 IPR017441 GO:0005524
Eupl07g00171 1246 ProSitePatterns Tyrosine protein kinases specific active-site signature. 598 610 IPR008266 GO:0004672|GO:0006468
Eupl07g00171 1246 PANTHER HISTIDYL-TRNA SYNTHETASE 790 1240 - -
Eupl07g00171 1246 Gene3D Transferase(Phosphotransferase) domain 1 562 752 - -
Eupl07g00171 1246 Gene3D - 1137 1235 IPR036621 -
Eupl07g00171 1246 MobiDBLite consensus disorder prediction 253 285 - -
Eupl07g00171 1246 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00171 Eupl-Chr7 3836076 3961453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00171 446 766 CBL-interacting serine-threonine protein kinases AT5G45820 26.807 3.99e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Eupl07g00171 Pkinase 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00171 K16196 - nnu:104605188 1762.66