Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00162 ATGATGAGCACATCCGGTCATGGATTTGATTTGATGGAAAGTGTTGGGGTACTGGAAGATGAAGCTTTAAACGAGTTTGAAACAGTAGAAGAGTCCGATGACACTAGTGGAAATGGCAAGATGGTTGAAGTTCCTGAAGAATTAGCTGGAAATGCGGGACCTTCAGAGCCGTATGTTGGCATGGAGTTCACATCAGCAGATGAGGCTAGGGAGTATTATCATGTGTATGCCAGGCATAACGGTTTCACTATACGTGTTAACCATAAGCGGAGATCACGGATAGATCGTGCAGTTATTGGTGTTGACTATGTCTGTTCAAAAGAAGGTTTTCGTCGAACCAAATATCTAAGGGAAGAAAAAGTAATTCGGTTATCGAAGCAAACAAGGGTAGGATGCAAGGCAATTTTAGTTATAACTTACAGGAGGAATTTAGAAAAATGGGTTGTTACTAATTTTGTACGAGAGCATAATCACGAGCTTATGGAAGTTCCGGTGGAACAATCAGATAAGGCGCTCAATGAGGATGAGAAGGATAAGAGAATTCGGGAATTAACTGCCAAGCTGTACAATGAGAGACAACGATTTCAACGACAATGTGCAGCATATGAAGCACGGTGCGCATCATATAAGGTTCAGTTAGGTAAGATTTTGGAAGACTTCGAGGTACACACTGAGCACCTAACAAAAAGAGTTCAAGGCGTAGTTCAGAGTATAAAAGAGGTTGAAGATGAAGTCAGACCATAG 744 0.4153 MMSTSGHGFDLMESVGVLEDEALNEFETVEESDDTSGNGKMVEVPEELAGNAGPSEPYVGMEFTSADEAREYYHVYARHNGFTIRVNHKRRSRIDRAVIGVDYVCSKEGFRRTKYLREEKVIRLSKQTRVGCKAILVITYRRNLEKWVVTNFVREHNHELMEVPVEQSDKALNEDEKDKRIRELTAKLYNERQRFQRQCAAYEARCASYKVQLGKILEDFEVHTEHLTKRVQGVVQSIKEVEDEVRP* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00162 247 Coils Coil 185 212 - -
Eupl07g00162 247 Pfam FAR1 DNA-binding domain 71 161 IPR004330 -
Eupl07g00162 247 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00162 Eupl-Chr7 3729513 3730999 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl07g00162 FAR1 3.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00162 - - nnu:104605198 350.132