Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00156 ATGATAGAGAGCTCTACTGGGAAAGAGTTAGTTGTATGTGAAGACGATGATATTGTGGAACCATACATGGGTATGGAATTTGATTCTGAAGAGGACGCCAAAGTATTCTATGATGGATATGCTACACGCATGGGCTTTGTCATGCGCGTTGATGCGTTTCGCCGATCCTTGCGTGATGGGAAGGTTATTTGCCGCCGACTCGTGTGTAACAAGGAAGGTTTTCGCAAAGCTAGACCCAAGCGGAGCGAAAGTAGGAAGCCGCGAGCGATCACGCGGGAGGGATGTAAGGCAATGGTTATGGTCAAGAAAGAGAAGTCTGGGAAATGGGTTGTTACAAGATTTGTAAAGGAGCATAATCATCCATTGGTGATTTCTTCTGGCAACACTCGTCGTAGTGTTCTTCTGGCTCAAACTCCTGATGAGAAAGATAAGAAGATCCGCGAATTGTCCACTGAGCTGCAGCGTGAGAAAAAACGATCGGCAGCTTATCAAGAACAGCTTCAAATGGTTTTAAAAGACATCGAGGAACACACCCAACACCTATCAAGAAACATTGAAGACATAGTTCAGAATGTGAAAATTATTGAATCGAAAAGGCAGAGAGAGGAATTGCAGGAGATTGAGATTCAGGCAAAGCCTGCTTATGTTCCTGCAATGCATGAGCACACCAAAAGCGAACACGATTGGAGAGGGAAGCAGGAATTTCTAAGGTTCTCAAAGCAAATTGCGACGAGGAGCCACTGCATGGAGAATTTGAGGTTTTTCCTGCAGACGTCAAAGAGTACATGTTGGATGCACAGCCGCTTTCGAGAAGCTTGTCTTCGCACATGGAAGACAGACCGCAAACGTCGAATTGAAAACTCTTATATTGTGGATTTTGGATTTCATCTTGATGAGGGATCCGGAACGATAGAAAGTTCTGTTGGAGGTGAGTTAGTTGAGTGTGATGGAGATGCAATTATAGAACCATATGAGGGTATGGAATTTGAATCTGAAGATGCTGCCAAGGCATTCTATGATGAGTATGCGAGACAGGTAGGATTTGTCGTGCGTGTTATGTCGTGCCGTCGTTCAGAAGTTGATGGAAGAATTCTTTCCCGTCGACTTGGATGTAATAAGGAGGGCCATTGTGTTAGTATAAGAGGAAAATTTGGGCCGGTTAGGAAGCCGCGAACAAGCACACGGGAAGGTTGCAAGGCGATGATTCAGGTAAAGACAGAGAAGTCTGGAAAATGGATTGTTACAAAATTTGTAAGGGACCATAATCATCCACTGGTGGTTTCTGCTCGCGAGTGTCGTTATGCTATGGATGAGAAGGATAAGAAAATTCAGGAACTAACTGCAGAGCTGCGGCGGAAGAAACGATTGTGTGCAGCATATCGAGAACAGCTACGAACGTTTATGAAAGACGTCGACGAACACTCTGAACATCTGTCAACAAAAGTTCAAACCATAGTTAACAATATGAGAGAGGTTGAATCTGAAGATCAAGAGCTTTCACAACACAGATAG 1512 0.4425 MIESSTGKELVVCEDDDIVEPYMGMEFDSEEDAKVFYDGYATRMGFVMRVDAFRRSLRDGKVICRRLVCNKEGFRKARPKRSESRKPRAITREGCKAMVMVKKEKSGKWVVTRFVKEHNHPLVISSGNTRRSVLLAQTPDEKDKKIRELSTELQREKKRSAAYQEQLQMVLKDIEEHTQHLSRNIEDIVQNVKIIESKRQREELQEIEIQAKPAYVPAMHEHTKSEHDWRGKQEFLRFSKQIATRSHCMENLRFFLQTSKSTCWMHSRFREACLRTWKTDRKRRIENSYIVDFGFHLDEGSGTIESSVGGELVECDGDAIIEPYEGMEFESEDAAKAFYDEYARQVGFVVRVMSCRRSEVDGRILSRRLGCNKEGHCVSIRGKFGPVRKPRTSTREGCKAMIQVKTEKSGKWIVTKFVRDHNHPLVVSARECRYAMDEKDKKIQELTAELRRKKRLCAAYREQLRTFMKDVDEHSEHLSTKVQTIVNNMREVESEDQELSQHR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00156 503 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 199 - -
Eupl07g00156 503 Pfam FAR1 DNA-binding domain 338 426 IPR004330 -
Eupl07g00156 503 Pfam FAR1 DNA-binding domain 36 123 IPR004330 -
Eupl07g00156 503 Coils Coil 436 463 - -
Eupl07g00156 503 Coils Coil 185 205 - -
Eupl07g00156 503 Coils Coil 146 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00156 Eupl-Chr7 3626235 3665741 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl07g00156 FAR1 2.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00156 - - tss:122647667 358.221