Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00153 ATGGGTGGGATTAGAGGTGTAAATTTGGCATGTCAGGCCAAGCTAGCAGTGAATTTCGGAGCTTATGTGTGTGAGGATGACAAGATGATAGAAGATTCTCTCAGAATGGAGATTGGTGCAGATGTGGACAACAAGATGATAGAAAGGTCTGTTGGAAGGGAAATTCATGAGGATGATGATGGAGAAATGTTTGAAATTTCTGATGGAAGGGAGTTAATGGTACATGAACTAGATGGAAATCTAGAACCTTATATTGGTATGGAGTTTGAATCTGAAGAGTCTGCTATGATATACTATGATGCTTATGCTAAGCGGGTAGGTTTTGTCATCCGTGTCGGTAATTGCCATCGTTCTGGTCGTGATGGATCAGTTATCAGTCGGAGATTTCTTTGTAACAAAGAAGGTTTCCGCATAAATAATAAGAAAACAAAGCGGATGGAAGTCAGGAAGCCACGGGCAGTCACGAGGGAAGGTTGCAAGGCGATGATTATGGTAAGGAAAGAGAAGTCTGGGAAATGGGTCGTTACAAAACTTGAAACGGAGCATAGTCATCCATTGGGGATACCCACCGGCAAGGGTCGTCGGGGTTCAGTTCAGGCTCGACCTCAGGATGAGAAGGATAAGAAAATTAGGGAACTGTCCTCTGAGCTTCATCGTGCAAATCAACGGTTGGCAGAATGTCGGGAACAACTCGACATGGTTTTGAAGGATATTGAACGACATACAAACCACCTAACAAAAAGTGTTCAGGACATAGTCGAGAATGTTAGAGAAATTGAATCTGAAGATCAAGACCATTCATACAGACTTAGCATTTAG 819 0.4274 MGGIRGVNLACQAKLAVNFGAYVCEDDKMIEDSLRMEIGADVDNKMIERSVGREIHEDDDGEMFEISDGRELMVHELDGNLEPYIGMEFESEESAMIYYDAYAKRVGFVIRVGNCHRSGRDGSVISRRFLCNKEGFRINNKKTKRMEVRKPRAVTREGCKAMIMVRKEKSGKWVVTKLETEHSHPLGIPTGKGRRGSVQARPQDEKDKKIRELSSELHRANQRLAECREQLDMVLKDIERHTNHLTKSVQDIVENVREIESEDQDHSYRLSI* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00153 272 MobiDBLite consensus disorder prediction 184 209 - -
Eupl07g00153 272 Pfam FAR1 DNA-binding domain 98 186 IPR004330 -
Eupl07g00153 272 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 263 - -
Eupl07g00153 272 Coils Coil 203 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00153 Eupl-Chr7 3571450 3589404 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl07g00153 FAR1 2.5e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00153 - - nnu:104605206 417.157